Skip to main content
Dataset Overview | National Centers for Environmental Information (NCEI)

Series 4A: Multiple stressor experiments on Synechococcus elongatus (CCMP1629) – nutrients from 2019-07-01 to 2019-08-01 (NCEI Accession 0291948)

browse graphicGraphic not available.
This dataset contains chemical, optical, and physical data collected from 2019-07-01 to 2019-08-01. These data include Nitrite, Partial pressure of CO2, irradiance, nitrate plus nitrite, reactive phosphorus (PO4), and water temperature. The instruments used to collect these data include Cell Cultivator and Nutrient Autoanalyzer. These data were collected by Dr Edward Laws of Louisiana State University and Nigel D'Souza and Uta Passow of University of California-Santa Barbara as part of the "Collaborative Research: Effects of multiple stressors on Marine Phytoplankton (Stressors on Marine Phytoplankton)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2020-08-31.

The following is the text of the dataset description provided by BCO-DMO:

Series 4A: nutrients

Dataset Description:
The experiments in Series 4A were designed to test the combined effects of two CO2 concentrations, four temperatures, and three light intensities on growth and photophysiology of the cyanobacteria Synechococcus elongatus CCMP1629 in a multifactorial design. This dataset contains measurements of nutrients (phosphate, nitrate, and nitrate + nitrite) made over the course of the experiments.
  • Cite as: Passow, Uta; Laws, Edward; D'Souza, Nigel (2024). Series 4A: Multiple stressor experiments on Synechococcus elongatus (CCMP1629) – nutrients from 2019-07-01 to 2019-08-01 (NCEI Accession 0291948). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291948. Accessed [date].
gov.noaa.nodc:0291948
Download Data
  • HTTPS (download)
    Navigate directly to the URL for data access and direct download.
  • FTP (download)
    These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
Distribution Formats
  • TSV
Ordering Instructions Contact NCEI for other distribution options and instructions.
Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2019-07-01 to 2019-08-01
Spatial Bounding Box Coordinates
West:
East:
South:
North:
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
      Navigate directly to the URL for data access and direct download.
  • Multiple stressor experiments on Synechococcus elongatus (CCMP1629) – nutrients. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2020-03-26. https://doi.org/10.26008/1912/bco-dmo.807026.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2024-04-27
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
The experiments were designed to test the combined effects of two CO 2 concentrations, four temperatures, and three light intensities on growth and photophysiology of the cyanobacterium Synechococcus elongatus CCMP1629 in a multifactorial design. Two CO 2 concentrations were tested: 410 ppm, and 1000 ppm. For each CO 2 concentration, four temperatures were tested: 20°C, 28°C, 36°C, and 44°C. Within each temperature, three light levels were tested: sub-optimum irradiance (SOI) intensity of 50 umol photons · m -2 · s -1 , optimum irradiance (OI) intensity of 230 umol photons · m -2 · s -1 and extreme Irradiance (EI) intensity of 600 umol photons · m -2 · s -1 . All lights were set at a 12 h day: 12 h dark cycle. For logistical reasons, experiments were partially conducted in series, with all light treatments at all four temperatures running simultaneously. This was repeated for each CO 2 concentration.

Experiments were conducted in Multicultivator MC-1000 OD units (Photon Systems Instruments, Drasov, Czech Republic). Each unit consists of eight 85 ml test-tubes immersed in a thermostated water bath, each independently illuminated by an array of cool white LEDs set at specific intensity and timing. A 0.2um filtered CO 2 -air mix (Praxair Distribution Inc.) was bubbled through sterile artificial seawater, and the humidified gas mix was supplied to each tube via gentle sparging through a 2um stainless steel diffuser. Flow rates were gradually increased over the course of the incubation to compensate for the DIC uptake of actively growing cells, and ranged from <0.04 Liters per minute (LPM) at the start of the incubations to 0.08 LPM in each tube after 2 days. For each CO 2 and temperature level, replication was achieved by incubating three tubes at sub-optimum light intensities, two tubes at optimum light intensity, and three tubes at extreme light intensities. Each experiment was split into two phases: An acclimation phase spanning 3 days, was used to acclimate cultures to their new environment. Pre-acclimated, exponentially-growing cultures were then inoculated into fresh media and incubated through a 3-day experimental phase during which assessments of growth, photophysiology, and nutrient cycling were carried out daily. All sampling started 5 hours into the daily light cycle to minimize effects of diurnal cycles.

Experiments were conducted with artificial seawater (ASW) prepared using previously described methods (Kester et. al 1967), and enriched with nitrate (NO 3 ), and phosphate (PO 4 ), at levels ensuring that the cultures would remain nutrient-replete over the course of the experiment. Trace metals and vitamins were added as in f/2 (Guillard 1975). The expected DIC concentration, and pH of the growth media was determined for the different pCO 2 and temperatures using the CO2SYS calculator (Pierrot et al. 2006), with constants from Mehrbach et al. (1973, refit by Dickson & Millero 1987), and inputs of temperature, salinity, total alkalinity (2376.5 umol · kg −1 ), pCO 2 , phosphate, and silicic acid. DIC levels in ASW at the start of each phase of the experiments were manipulated by the addition of NaHCO 3 , and was then maintained by bubbling a CO 2 -Air mix through the cultures over the course of the experiments. The pH of the growth media was measured spectrophometrically using the m-cresol purple method (Dickson 1993), and adjusted using 0.1N HCl or 0.1M NaOH. The media was distributed into 75 ml aliquots and each aliquot was inoculated with the S. elongatus CCMP 1629 (SE1629) stock culture at the start of the experiments.

Macronutrient concentrations:

Media was filtered through 0.2 um filters into clean (plastic) bottles and stored at -20°C until analyses for nutrients. During the experiment, subsamples were filtered through 0.2 micron filters for Chl-a analyses, and through GF/F filters for particulate carbon (POC) analyses. The filtrate from these filtrations was pooled into acid-washed HDPE containers, and stored at -20°C until analyses. Replicates were not pooled on the final day of the experiment. Phosphate (PO4), Nitrite (NO2), and Nitrate (NO3) + Nitrite (NO2) were measured by Flow injection analysis (FIA) using a QuikChem 8500 Series 2 AutoAnalyzer (Lachat Instruments, Zellweger Analytics, Inc.).
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Passow, Uta; Laws, Edward; D'Souza, Nigel (2024). Series 4A: Multiple stressor experiments on Synechococcus elongatus (CCMP1629) – nutrients from 2019-07-01 to 2019-08-01 (NCEI Accession 0291948). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291948. Accessed [date].
Cited Authors
Principal Investigators
Contributors
Resource Providers
Points of Contact
Publishers
Acknowledgments
Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Project keywords BCO-DMO Standard Projects Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Passow, Uta; Laws, Edward; D'Souza, Nigel (2024). Series 4A: Multiple stressor experiments on Synechococcus elongatus (CCMP1629) – nutrients from 2019-07-01 to 2019-08-01 (NCEI Accession 0291948). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291948. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees
  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2024-04-27T17:37:24Z - NCEI Accession 0291948 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • nutrient autoanalyzer
Last Modified: 2024-05-31T15:15:28Z
For questions about the information on this page, please email: ncei.info@noaa.gov