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Fatty acid profiles by biovolume of replicate populations of Thalassiosira pseudonana, selected at 16 and 31C for ~500 generations and assayed at 4 temperatures from 2017-12-09 to 2018-01-05 (NCEI Accession 0291927)

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This dataset contains biological and physical data collected from 2017-12-09 to 2018-01-05. These data include lipids in biota, taxon, and water temperature. The instruments used to collect these data include Automated Cell Counter and Gas Chromatograph. These data were collected by Daniel R. O'Donnell and Elena Litchman of Michigan State University as part of the "Dimensions: Collaborative Research: Genetic, functional and phylogenetic diversity determines marine phytoplankton community responses to changing temperature and nutrients (Phytoplankton Community Responses)" project and "Dimensions of Biodiversity (Dimensions of Biodiversity)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2021-01-28.

The following is the text of the dataset description provided by BCO-DMO:

T. pseudonana fatty acids by biovolume

Dataset Description:
Fatty acid profiles by biovolume of replicate populations of Thalassiosira pseudonana , selected at 16 and 31C for ~500 generations and assayed at 4 temperatures.

These data were published in O'Donnell and Litchman (2019) Evol. Appl. and can also be found in Supporting Information file eva12798-sup-0001-Supinfo.docx, Figures 1-5 of the main text, and on Dryad: https://datadryad.org/stash/dataset/https://doi.org/10.5061/dryad.pn04m84.
  • Cite as: Litchman, Elena; O'Donnell, Daniel R. (2024). Fatty acid profiles by biovolume of replicate populations of Thalassiosira pseudonana, selected at 16 and 31C for ~500 generations and assayed at 4 temperatures from 2017-12-09 to 2018-01-05 (NCEI Accession 0291927). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291927. Accessed [date].
gov.noaa.nodc:0291927
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Distribution Formats
  • TSV
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2017-12-09 to 2018-01-05
Spatial Bounding Box Coordinates
West: -85.4007
East: -85.4007
South: 42.4061
North: 42.4061
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • O'Donnell, D. R., Litchman, E. (2019) Fatty acid profiles by biovolume of replicate populations of Thalassiosira pseudonana, selected at 16 and 31C for ~500 generations and assayed at 4 temperatures. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2019-10-28. https://doi.org/10.26008/1912/bco-dmo.780155.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2024-04-27
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
Details of the long-term selection experiment can be found in another dataset associated with this project, entitled “Temperature-growth rate curves for Thalassiosira pseudonana ”, and in O’Donnell et al. (2018), Global Change Biology. After ~500 generations of experimental selection (5 replicate populations at 16°C and 5 at 31°C), we acclimated each replicate population for 10 generations at 20°C, then acclimated each at 10, 16, 26 and 31°C for an additional 10 generations. We then sub-cultured each acclimated population into triplicate batch cultures, starting with 100,000 cells in 40 ml of L1 marine culture medium in a 50 ml tissue culture flask. We grew all experimental cultures (2 selection temperatures x 5 replicate populations x 4 assay temperatures x 3 assay replicates = 120 total experimental units) to late log phase, estimating per-capita growth rates by placing each tissue culture flask in a spectrophotometer daily and measuring absorbance at 436 nm. We harvested 15 ml of culture for fatty acid analysis, retaining ~25 µl for enumeration on a CASY particle counter. The remaining volume was used for analyses not addressed here.

Cells were harvested by filtration through a 25mm Whatman GF/B filter. We extracted fatty acids from T. pseudonana cells using a solution of chloroform, methanol, and formic acid (10:20:1). We analyzed fatty acid profiles by performing fatty acid methyl ester (FAME) reactions on each GF/B filter sample (Wang and Benning 2011; adapted for algae by Boyle et al. 2012) and quantifying fatty acids using gas chromatography.
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Project keywords BCO-DMO Standard Programs BCO-DMO Standard Projects Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Litchman, Elena; O'Donnell, Daniel R. (2024). Fatty acid profiles by biovolume of replicate populations of Thalassiosira pseudonana, selected at 16 and 31C for ~500 generations and assayed at 4 temperatures from 2017-12-09 to 2018-01-05 (NCEI Accession 0291927). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291927. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees
  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2024-04-27T17:12:29Z - NCEI Accession 0291927 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • chromatograph
Last Modified: 2024-05-31T15:15:28Z
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