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H2S microsensor profiling conducted alongside the destructive sampling of Chesapeake Bay sediments during incubation experiments at Horn Point Lab from 2018-12-01 to 2019-01-31 (NCEI Accession 0291917)

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This dataset contains chemical data collected from 2018-12-01 to 2019-01-31. These data include H2S and depth core. The instruments used to collect these data include Unisense H2S microsensor. These data were collected by Sairah Malkin of University of Maryland Center for Environmental Science as part of the "Collaborative Research: Probing the Metabolic and Electrical Interactions of Cable Bacteria in Anoxic Sediments (Anoxic Sediment Bacteria Interactions)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2022-11-14.

The following is the text of the dataset description provided by BCO-DMO:

Microsensor Profiling H2S

Dataset Description:
Acquisition Description:
The source material was collected from Chesapeake Bay (38.55505 N, 76.42794 W) (mesohaline), water column depth 26 meters, sediment horizon 0-10 centimeter below sea floor.

Incubation conditions: 16 degrees Celsius, S=15.5, dark, aerated.

Incubation Set-up: Sediments were homogenized and packed into polycarbonate core liners, sealed with a stopper at the bottom, and open to aerated aquarium water at the top. In a subset of cores, a polycarbonate filter (pore size 0.2 microns) was secured at 0.5 cm depth, to prevent downward growth of cable bacteria in these treatments. Sediments were incubated for up to 46 days. At 6 time points, microsensor profiles were measured, followed by destructive sampling.

Porewater extraction : Sediments were sectioned at 0.5 cm depth increments in an anaerobic glove bag under nitrogen atmosphere. Porewaters were separated by centrifugation (3500 rpm for 10 minutes), and filtered (0.2 micron) and aliquoted in the anaerobic glove bag. Samples for ferrous iron measurements were preserved with trace-metal grade nitric acid (final pH < 2).

Microsensor Profiling: High-resolution microsensor profiling of oxygen (O2), pH, and hydrogen sulfide (H2S) was performed on replicate sediment cores with 1 profile made per sediment core per analyte, using commercial microsensors operated with a motorized micromanipulator (Unisense A.S., Denmark). Oxygen sensor data were calibrated with a 2-point calibration using air-saturated water and anoxic zone of sediments. pH sensors were calibrated with a 3-point NBS buffer calibration. Sulfide (SumH2S) was calibrated with 5-point calibration using NaS2 (0-300 micromolar), and corrected with pH at the corresponding depth. Detailed methodology is given in Malkin et al. 2014.
  • Cite as: Malkin, Sairah (2024). H2S microsensor profiling conducted alongside the destructive sampling of Chesapeake Bay sediments during incubation experiments at Horn Point Lab from 2018-12-01 to 2019-01-31 (NCEI Accession 0291917). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291917. Accessed [date].
gov.noaa.nodc:0291917
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2018-12-01 to 2019-01-31
Spatial Bounding Box Coordinates
West: -76.42794
East: -76.42794
South: 38.55505
North: 38.55505
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • Malkin, S. (2022) H2S microsensor profiling conducted alongside the destructive sampling of Chesapeake Bay sediments during incubation experiments at Horn Point Lab. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-11-09. https://doi.org/10.26008/1912/bco-dmo.883506.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2024-04-27
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Malkin, Sairah (2024). H2S microsensor profiling conducted alongside the destructive sampling of Chesapeake Bay sediments during incubation experiments at Horn Point Lab from 2018-12-01 to 2019-01-31 (NCEI Accession 0291917). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291917. Accessed [date].
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Instrument keywords BCO-DMO Standard Instruments Originator Instrument Names
Project keywords BCO-DMO Standard Projects Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Malkin, Sairah (2024). H2S microsensor profiling conducted alongside the destructive sampling of Chesapeake Bay sediments during incubation experiments at Horn Point Lab from 2018-12-01 to 2019-01-31 (NCEI Accession 0291917). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291917. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2024-04-27T17:00:27Z - NCEI Accession 0291917 v1.1 was published.
Output Datasets
Last Modified: 2024-05-31T15:15:28Z
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