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Dataset Overview | National Centers for Environmental Information (NCEI)

Octocoral colony density by pooled taxa, life stage, and year from surveys conducted in St. John, US Virgin Islands from 2014 to 2017 (NCEI Accession 0291433)

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This dataset contains biological, physical, and survey - biological data collected from 2014-01-01 to 2017-01-01. These data include density, stage, and taxon. The instruments used to collect these data include Measuring Tape. These data were collected by Peter J. Edmunds of California State University Northridge and Howard Lasker of State University of New York at Buffalo as part of the "Collaborative Research: Pattern and process in the abundance and recruitment of Caribbean octocorals (Octocoral Community Dynamics)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2020-02-14.

The following is the text of the dataset description provided by BCO-DMO:

Dataset Description: Octocoral colony density pooled by taxon and year from surveys conducted in St. John, US Virgin Islands from 2014 to 2017. These data were used in Edmunds and Lasker (2019) Figure 1.

Related Datasets: all were used in Edmunds and Lasker (2019):

* Edmunds and Lasker MEPS 2019 Fig 1a: Density pooled taxa and one year https://www.bco-dmo.org/dataset/789128 * Edmunds and Lasker MEPS 2019 Fig 1b: Height pooled taxa and one year https://www.bco-dmo.org/dataset/789140 * Edmunds and Lasker MEPS 2019 Fig 2a: Density by taxon and year https://www.bco-dmo.org/dataset/789145 * Edmunds and Lasker MEPS 2019 Fig 2b: Height by taxon and year https://www.bco-dmo.org/dataset/789149 * Edmunds and Lasker MEPS 2019 Fig 3: Community NMDS https://www.bco-dmo.org/dataset/789181 * Edmunds and Lasker MEPS 2019 Fig S1: Sampling effort https://www.bco-dmo.org/dataset/789188 * Edmunds and Lasker MEPS 2019 Fig S3: Sampling effort, juveniles https://www.bco-dmo.org/dataset/789195 * Edmunds and Lasker MEPS 2019 Fig S4: Colony sizes https://www.bco-dmo.org/dataset/789202 * Edmunds and Lasker MEPS 2019 Fig S5a: Density https://www.bco-dmo.org/dataset/789210 * Edmunds and Lasker MEPS 2019 Fig S5b: Height https://www.bco-dmo.org/dataset/789217
  • Cite as: Edmunds, Peter J.; Lasker, Howard (2024). Octocoral colony density by pooled taxa, life stage, and year from surveys conducted in St. John, US Virgin Islands from 2014 to 2017 (NCEI Accession 0291433). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291433. Accessed [date].
gov.noaa.nodc:0291433
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2014-01-01 to 2017-01-01
Spatial Bounding Box Coordinates
West: -64.723
East: -64.723
South: 18.32
North: 18.32
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • Edmunds, P. J., Lasker, H. (2020) Octocoral colony density by pooled taxa, life stage, and year from surveys conducted in St. John, US Virgin Islands from 2014 to 2017. Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2020-02-04. https://doi.org/10.1575/1912/bco-dmo.789128.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2024-04-20
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
The following methodology applies to this dataset in addition to other datasets published in Edmunds and Lasker (2019).

Sampling and analytical procedures:

Surveys were completed at six sites on shallow (7–9-m depth) fringing reefs on the south shore of St. John, between Cabritte Horn and White Point. In 1992, these sites were randomly selected on hard substrata along 4.5 km of shore between these headlands, and they have been censused annually to present. Each site consists of a permanently marked transect that has been 40-m long since 2000. The present project began in 2014 with the objective of augmenting a long-standing analysis of benthic community structure (which emphasized scleractinians with new analyses focused on octocorals. As part of this effort, arborescent octocorals were surveyed in situ with genus resolution, using 40 quadrats (0.5 × 0.5 m) placed at random, non-overlapping positions along the same transect (and re-randomized annually) located at each of the six sites. Surveys were completed over four weeks beginning on ~ 20th July of each of 2014–2017, and were conducted by counting and measuring the height of octocorals attached by holdfasts within each quadrat.

Height was determined (± 1 cm) using a flexible tape measure stretched from the holdfast to the colony apex. Abundances were analyzed separately for adults (> 5-cm tall), and recruits (≤ 5-cm tall), with this size cut-off based on the maximal height to which the recruits of most octocoral species are likely to grow in one year. While the benthos was inspected for all small octocorals, sampling efficiency probably was low for recruits consisting of only a few polyps (i.e., < 1-cm tall). Analyses testing for the effects of density dependence (DD) and self-thinning (ST) were first, completed for octocorals pooled among taxa, and second, for the three most common genera of octocorals. Evidence of DD recruitment also was sought from analyses of per capita recruitment by site, with these values obtained by dividing the density of recruits by mean density of adults.

For more information about statistical analyses performed using these data see Edmunds and Lasker (2019).
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Edmunds, Peter J.; Lasker, Howard (2024). Octocoral colony density by pooled taxa, life stage, and year from surveys conducted in St. John, US Virgin Islands from 2014 to 2017 (NCEI Accession 0291433). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291433. Accessed [date].
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Instrument keywords BCO-DMO Standard Instruments Originator Instrument Names
Project keywords BCO-DMO Standard Projects Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Edmunds, Peter J.; Lasker, Howard (2024). Octocoral colony density by pooled taxa, life stage, and year from surveys conducted in St. John, US Virgin Islands from 2014 to 2017 (NCEI Accession 0291433). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291433. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2024-04-20T19:47:54Z - NCEI Accession 0291433 v1.1 was published.
Output Datasets
Last Modified: 2024-05-31T15:15:28Z
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