Differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments - Experiments 2a and 2b from 2021-08-09 to 2022-04-27 (NCEI Accession 0291412)
This dataset contains chemical and physical data collectedat Southern California coastal waters near Seal Beach and Long Beach from 2021-08-09 to 2022-04-27. These data include Partial pressure of CO2 and water temperature. The instruments used to collect these data include plate reader. These data were collected by Darren Johnson of California State University Long Beach as part of the "RUI: Evaluating selection via ocean acidification and evolutionary responses of two coastal fishes (OA and natural selection)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2024-04-09.
The following is the text of the dataset description provided by BCO-DMO:
Specific Dynamic Action of larval grunion - Experiments 2a and 2b
Dataset Description:
Methods and Sampling:
To measure oxygen consumption, individual larvae were placed within chambers of a closed microplate reader system that uses optical fluorescence to measure oxygen concentration (PreSens, Germany). After a 5-minute acclimation period, the change in dissolved oxygen was measured every 30 seconds over 20 minutess. The microplate reader had 2 blocks of 24 wells.
In Experiment 1 (see Related Datasets), 20 fish larvae were measured per run. In Experiment 2, 40 fish were measured per run. For all chambers, the investigators ran a linear regression of oxygen concentration on time (n = 40 measurements). The respiration rate for each fish (VO2, expressed in milligrams of O2 per individual per hour (mg O2 ind-1 h-1)) was calculated as:
VO2 = V (S – B)
where S is the slope describing the change in O2 concentration for individual chambers with the fish,
B is the average slope for the four chambers with no fish (both in units of milligrams O2 per liter per hour (mg O2 L-1 h-1) and inferred to be per individual since each well held only one larvae), and
V is the volume of water in the chamber (1.500 × 10-3 liters (L)).
Note the displacement volume of grunion larvae in this study was <2.5 × 10-6 L and thus negligible in these calculations. Fish were assigned to each chamber at random, and larvae were used once in the respiration measurements and then humanely euthanized.
To describe the duration and magnitude of the Specific Dynamic Action (SDA) response, the investigators first calculated delta.VO2, the difference between the mean rates of oxygen consumption for the pair of fed and non-fed larvae.
These data were summarized by Siegfried and Johnson (2023) and plotted in figures 1, 3, and 5.
The following is the text of the dataset description provided by BCO-DMO:
Specific Dynamic Action of larval grunion - Experiments 2a and 2b
Dataset Description:
Methods and Sampling:
To measure oxygen consumption, individual larvae were placed within chambers of a closed microplate reader system that uses optical fluorescence to measure oxygen concentration (PreSens, Germany). After a 5-minute acclimation period, the change in dissolved oxygen was measured every 30 seconds over 20 minutess. The microplate reader had 2 blocks of 24 wells.
In Experiment 1 (see Related Datasets), 20 fish larvae were measured per run. In Experiment 2, 40 fish were measured per run. For all chambers, the investigators ran a linear regression of oxygen concentration on time (n = 40 measurements). The respiration rate for each fish (VO2, expressed in milligrams of O2 per individual per hour (mg O2 ind-1 h-1)) was calculated as:
VO2 = V (S – B)
where S is the slope describing the change in O2 concentration for individual chambers with the fish,
B is the average slope for the four chambers with no fish (both in units of milligrams O2 per liter per hour (mg O2 L-1 h-1) and inferred to be per individual since each well held only one larvae), and
V is the volume of water in the chamber (1.500 × 10-3 liters (L)).
Note the displacement volume of grunion larvae in this study was <2.5 × 10-6 L and thus negligible in these calculations. Fish were assigned to each chamber at random, and larvae were used once in the respiration measurements and then humanely euthanized.
To describe the duration and magnitude of the Specific Dynamic Action (SDA) response, the investigators first calculated delta.VO2, the difference between the mean rates of oxygen consumption for the pair of fed and non-fed larvae.
These data were summarized by Siegfried and Johnson (2023) and plotted in figures 1, 3, and 5.
Dataset Citation
- Cite as: Johnson, Darren (2024). Differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments - Experiments 2a and 2b from 2021-08-09 to 2022-04-27 (NCEI Accession 0291412). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291412. Accessed [date].
Dataset Identifiers
ISO 19115-2 Metadata
gov.noaa.nodc:0291412
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NOAA National Centers for Environmental Information +1-301-713-3277 NCEI.Info@noaa.gov |
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NOAA National Centers for Environmental Information ncei.info@noaa.gov |
Coverage Description | Southern California coastal waters near Seal Beach and Long Beach |
Time Period | 2021-08-09 to 2022-04-27 |
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Last Modified: 2024-05-31T15:15:28Z
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