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Differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments - Experiments 2a and 2b from 2021-08-09 to 2022-04-27 (NCEI Accession 0291412)

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This dataset contains chemical and physical data collectedat Southern California coastal waters near Seal Beach and Long Beach from 2021-08-09 to 2022-04-27. These data include Partial pressure of CO2 and water temperature. The instruments used to collect these data include plate reader. These data were collected by Darren Johnson of California State University Long Beach as part of the "RUI: Evaluating selection via ocean acidification and evolutionary responses of two coastal fishes (OA and natural selection)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2024-04-09.

The following is the text of the dataset description provided by BCO-DMO:

Specific Dynamic Action of larval grunion - Experiments 2a and 2b

Dataset Description:
Methods and Sampling:
To measure oxygen consumption, individual larvae were placed within chambers of a closed microplate reader system that uses optical fluorescence to measure oxygen concentration (PreSens, Germany). After a 5-minute acclimation period, the change in dissolved oxygen was measured every 30 seconds over 20 minutess. The microplate reader had 2 blocks of 24 wells.

In Experiment 1 (see Related Datasets), 20 fish larvae were measured per run. In Experiment 2, 40 fish were measured per run. For all chambers, the investigators ran a linear regression of oxygen concentration on time (n = 40 measurements). The respiration rate for each fish (VO2, expressed in milligrams of O2 per individual per hour (mg O2 ind-1 h-1)) was calculated as:

VO2 = V (S – B)

where S is the slope describing the change in O2 concentration for individual chambers with the fish,
B is the average slope for the four chambers with no fish (both in units of milligrams O2 per liter per hour (mg O2 L-1 h-1) and inferred to be per individual since each well held only one larvae), and
V is the volume of water in the chamber (1.500 × 10-3 liters (L)).

Note the displacement volume of grunion larvae in this study was <2.5 × 10-6 L and thus negligible in these calculations. Fish were assigned to each chamber at random, and larvae were used once in the respiration measurements and then humanely euthanized.

To describe the duration and magnitude of the Specific Dynamic Action (SDA) response, the investigators first calculated delta.VO2, the difference between the mean rates of oxygen consumption for the pair of fed and non-fed larvae.

These data were summarized by Siegfried and Johnson (2023) and plotted in figures 1, 3, and 5.
  • Cite as: Johnson, Darren (2024). Differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments - Experiments 2a and 2b from 2021-08-09 to 2022-04-27 (NCEI Accession 0291412). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291412. Accessed [date].
gov.noaa.nodc:0291412
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Coverage Description Southern California coastal waters near Seal Beach and Long Beach
Time Period 2021-08-09 to 2022-04-27
Spatial Bounding Box Coordinates
West:
East:
South:
North:
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • Johnson, D. (2024) Differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments - Experiments 2a and 2b. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-04-09. https://doi.org/10.26008/1912/bco-dmo.924613.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2024-04-20
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Johnson, Darren (2024). Differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments - Experiments 2a and 2b from 2021-08-09 to 2022-04-27 (NCEI Accession 0291412). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291412. Accessed [date].
Cited Authors
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Instrument keywords BCO-DMO Standard Instruments Originator Instrument Names
Project keywords BCO-DMO Standard Projects Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Johnson, Darren (2024). Differences in mean oxygen consumption of fed and unfed larvae used to understand the metabolic cost of digestion, Specific Dynamic Action (SDA), under ocean acidification and warming treatments - Experiments 2a and 2b from 2021-08-09 to 2022-04-27 (NCEI Accession 0291412). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291412. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees
  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2024-04-20T16:40:36Z - NCEI Accession 0291412 v1.1 was published.
Output Datasets
Last Modified: 2024-05-31T15:15:28Z
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