Skip to main content
Dataset Overview | National Centers for Environmental Information (NCEI)

Experimental results: summary of microcosm data from Dauphin Island Cubitainer Experiment (DICE) from samples collected by R/V E.O. Wilson in the Gulf of Mexico, Alabama (En-Gen DMSP Cycling project) from 2006-10-01 to 2006-10-31 (NCEI Accession 0291389)

browse graphicGraphic not available.
This dataset contains biological data collected on R/V E.O. Wilson during cruise DMSP_Dauphin_Island from 2006-10-01 to 2006-10-31. These data include chlorophyll-a; fluorometric method. The instruments used to collect these data include Turner Designs 700 Laboratory Fluorometer and bucket. These data were collected by Ronald Kiene of Dauphin Island Sea Lab and Mary Ann Moran and William Whitman of University of Georgia as part of the "En-Gen: A Functional Genomics Approach to Organic Sulfur Cycling in the Ocean (En-Gen DMSP Cycling)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2019-11-01.

The following is the text of the dataset description provided by BCO-DMO:

Summary of microcosm data from Dauphin Island Cubitainer Experiment (DICE).

Dataset Description:
Summary of parameters measured in experimental and control microcosms as part of the Dauphin Island Cubitainer Experiment (DICE).

Experimental design, methods, and results are further described in Howard et al. (2010) and Rinta-Kanto et al. (2011).
  • Cite as: Moran, Mary Ann; Kiene, Ronald P.; Whitman, William (2024). Experimental results: summary of microcosm data from Dauphin Island Cubitainer Experiment (DICE) from samples collected by R/V E.O. Wilson in the Gulf of Mexico, Alabama (En-Gen DMSP Cycling project) from 2006-10-01 to 2006-10-31 (NCEI Accession 0291389). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291389. Accessed [date].
gov.noaa.nodc:0291389
Download Data
  • HTTPS (download)
    Navigate directly to the URL for data access and direct download.
  • FTP (download)
    These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
Distribution Formats
  • TSV
Ordering Instructions Contact NCEI for other distribution options and instructions.
Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2006-10-01 to 2006-10-31
Spatial Bounding Box Coordinates
West: -87.99513
East: -87.99513
South: 30.05068
North: 30.05068
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
      Navigate directly to the URL for data access and direct download.
  • summary of microcosm data from Dauphin Island Cubitainer Experiment (DICE) from samples collected by R/V E.O. Wilson in the Gulf of Mexico, Alabama (En-Gen DMSP Cycling project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2012-11-19. https://doi.org/10.1575/1912/bco-dmo.3857.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2024-04-20
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
See Howard et al. 2011 and Rinta-Kanto et al. 2011 for detailed methods, summarized below:

"In October 2006, seawater was collected from surface waters (<1 m deep) in the Gulf of Mexico off the coast of Dauphin Island, AL (lat: 30 03.041N; lon: 87 59.708W). Water was filtered through a 200-um mesh into six 20-liter polyethylene Cubitainers with minimal headspace.

Three microcosms were amended with 10 um sodium nitrate (NaNO3) and 0.6 um potassium phosphate (K2HPO4) to serve as the experimental microcosms. Three microcosms were left untreated to serve as the control. The Cubitainers were maintained at 27 degrees C on a 12-hour light/dark cycle for the duration of the experiment.

Chemical and activity measurements were collected from the microcosms at the beginning of the experiment (Day 0) and every day for the duration of the experiment at the same time. Chlorophyll-a samples were collected by filtration on Whatman GF/F fiters. The filters were extracted in 90% acetone for 24 hours at -20 degrees C. The extracts were quantified by fluorometry on a Turner Designs TD-700.

Samples for dissolved dimethylsulfoniopropionate (DMSPd) were collected by filtration through GF/F filters. Total dimethylsulfoniopropionate (DMSP), dissolved + particulate, was measured by acidifying whole seawater with 5 ul per ml of 50% H2SO4. Dissolved and total DMSP were quantified as dimethylsulfide (DMS) after alkaline hydrolysis. Bacterial production was measured by [3H]leucine incorporation.

Rates of DMSPd consumption were determined by multiplying the DMSPd concentrations by their respective DMSPd loss rate constant from parallel samples. DMSPd consumption rate constants were determined by measuring the loss of tracer levels of [35S]-DMSP from the dissolved (< 0.2 um) pool over time. DMS production and DMS yield (ratio of DMS production to DMSPd consumption) were measured as described in Vila-Costa et al. (2008)"

References:
Vila-Costa, M., Kiene, R.P., and Simó, R. (2008) Seasonal variability of the dynamics of dimethylated sulfur compounds in a coastal northwest mediterranean site. Limnol Oceanogr 53: 198–211.
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Moran, Mary Ann; Kiene, Ronald P.; Whitman, William (2024). Experimental results: summary of microcosm data from Dauphin Island Cubitainer Experiment (DICE) from samples collected by R/V E.O. Wilson in the Gulf of Mexico, Alabama (En-Gen DMSP Cycling project) from 2006-10-01 to 2006-10-31 (NCEI Accession 0291389). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291389. Accessed [date].
Cited Authors
Principal Investigators
Contributors
Resource Providers
Points of Contact
Publishers
Acknowledgments
Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Place keywords Provider Place Names
Project keywords BCO-DMO Standard Projects Provider Cruise IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Moran, Mary Ann; Kiene, Ronald P.; Whitman, William (2024). Experimental results: summary of microcosm data from Dauphin Island Cubitainer Experiment (DICE) from samples collected by R/V E.O. Wilson in the Gulf of Mexico, Alabama (En-Gen DMSP Cycling project) from 2006-10-01 to 2006-10-31 (NCEI Accession 0291389). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0291389. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees
  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2024-04-20T16:20:53Z - NCEI Accession 0291389 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • bucket
  • fluorometer
Last Modified: 2024-05-31T15:15:28Z
For questions about the information on this page, please email: ncei.info@noaa.gov