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Dataset Overview | National Centers for Environmental Information (NCEI)

Molecular species delimitation and gene flow in Oxynoe (PLDvFST project) from 1974-07-01 to 2014-12-31 (NCEI Accession 0288314)

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This dataset contains biological and survey - biological data collectedat Florida and Caribbean from 1974-07-01 to 2014-12-31. These data include species. The instruments used to collect these data include Automated DNA Sequencer and PCR Thermal Cycler. These data were collected by Patrick Krug of California State University Los Angeles as part of the "Quantifying larval behavior to reconcile genetic connectivity with biophysical model predictions (PLDvFST)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2019-06-12.

The following is the text of the dataset description provided by BCO-DMO:

Species names, sample codes, and collection details for sequenced taxa used in phylogenetic analyses.

Dataset Description:
Species names, sample codes, and collection details for sequenced sea slugs in the family Oxynoidae that were used in phylogenetic analyses. Collections range from 1974 to 2014 from global locations near Florida, the Caribbean, and the East and West Pacific Ocean. Data are accessioned through the NCBI GenBank database.
  • Cite as: Krug, Patrick (2024). Molecular species delimitation and gene flow in Oxynoe (PLDvFST project) from 1974-07-01 to 2014-12-31 (NCEI Accession 0288314). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0288314. Accessed [date].
gov.noaa.nodc:0288314
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Distribution Formats
  • TSV
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Coverage Description Florida and Caribbean
Time Period 1974-07-01 to 2014-12-31
Spatial Bounding Box Coordinates
West:
East:
South:
North:
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
      Navigate directly to the URL for data access and direct download.
  • Krug, P. (2017) Molecular species delimitation and gene flow in Oxynoe (PLDvFST project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2017-09-22. https://doi.org/10.1575/1912/bco-dmo.715506.1
    • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2024-02-02
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
Purified PCR products were directly cycle-sequenced in both directions using PCR primers and Big Dye Terminator 3.1 Cycle Sequencing chemistry Retrogen, Inc. (San Diego). Chromatograms were edited and primer sequences removed in GeneiousPro 4.8 software. Samples for morphological analysis were deposited in museum collections, sequences were archived in GenBank for public access.
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Krug, Patrick (2024). Molecular species delimitation and gene flow in Oxynoe (PLDvFST project) from 1974-07-01 to 2014-12-31 (NCEI Accession 0288314). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0288314. Accessed [date].
Cited Authors
Principal Investigators
Contributors
Resource Providers
Points of Contact
Publishers
Acknowledgments
Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Originator Instrument Names
Project keywords BCO-DMO Standard Projects Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Krug, Patrick (2024). Molecular species delimitation and gene flow in Oxynoe (PLDvFST project) from 1974-07-01 to 2014-12-31 (NCEI Accession 0288314). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0288314. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees
  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2024-02-02T15:24:45Z - NCEI Accession 0288314 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • PCR machine
Last Modified: 2024-05-31T15:15:28Z
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