Dataset Overview | National Centers for Environmental Information (NCEI)

Salp specimen log for genomic and transcriptomic study collected from ARSV Laurence M. Gould, Umitaka-Maru, R/V Polarstern LMG1110, UM-08-09, ANT-XXVII-2 in the Southern Ocean from 2009-2011 (Salp_Antarctic project) (NCEI Accession 0278872)

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This dataset contains physical data collected on ARSV Laurence M. Gould, R/V Polarstern, and Umitaka-Maru during cruises ANT-XXVII-2, LMG1110, and UM-08-09 in the Indian Ocean, South Atlantic Ocean, South Pacific Ocean, and Southern Ocean from 2009-01-12 to 2011-12-02. These data include salinity calculated from CTD primary sensors and water temperature. The instruments used to collect these data include Isaacs-Kidd Midwater Trawl, MOCNESS1, and Midwater Trawl. These data were collected by Dr Diana Payne of Connecticut Sea Grant and Dr Ann Bucklin and Dr Rachel J. O'Neill of University of Connecticut as part of the "Population ecology of Salpa thompsoni based on molecular indicators (Salp_Antarctic)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2018-02-23.

The following is the text of the dataset description provided by BCO-DMO:

scientific sampling event log

Dataset Description:
This dataset is a log of the Salpa thompsoni specimens used for genomics/transcriptomics. Reported parameters include cruise id, region, season and area, location, number of samples collected, temperature, salinity, depth range of the samples, and the depth of the water at the collection site.

Related Dataset: Salp genome and transcriptome

Dataset Citation

Cite as: Bucklin, Ann; O'Neill, Rachel J.; Payne, Diana (2023). Salp specimen log for genomic and transcriptomic study collected from ARSV Laurence M. Gould, Umitaka-Maru, R/V Polarstern LMG1110, UM-08-09, ANT-XXVII-2 in the Southern Ocean from 2009-2011 (Salp_Antarctic project) (NCEI Accession 0278872). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278872. Accessed [date].

Dataset Identifiers

ISO 19115-2 Metadata

gov.noaa.nodc:0278872

Full Text · XML

Download Data	HTTPS (download) Navigate directly to the URL for data access and direct download. FTP (download) These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
Distribution Formats	TSV
Ordering Instructions	Contact NCEI for other distribution options and instructions.
Distributor	NOAA National Centers for Environmental Information +1-301-713-3277 NCEI.Info@noaa.gov
Dataset Point of Contact	NOAA National Centers for Environmental Information ncei.info@noaa.gov

Time Period	2009-01-12 to 2011-12-02
Spatial Bounding Box Coordinates	West: -74.567 East: 42.002 South: -66.183 North: -60.901
Spatial Coverage Map

General Documentation

NCEI Dataset Landing Page
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Descriptive Information
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Associated Resources

Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
- NCEI Collection
  Navigate directly to the URL for data access and direct download.
Bucklin, Ann, Bucklin, Ann, O'Neill, Rachel and Payne, Diana (2017) Salp specimen log for genomic and transcriptomic study collected from ARSV Laurence M. Gould, Umitaka-Maru, R/V Polarstern LMG1110, UM-08-09, ANT-XXVII-2 in the Southern Ocean from 2009-2011 (Salp_Antarctic project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2017-01-06. https://doi.org/10.1575/1912/bco-dmo.728220
- https://doi.org/10.1575/1912/bco-dmo.728220 (download)
  originator dataset

gov.noaa.nodc:BCO-DMO

Publication Dates	publication: 2023-05-28
Data Presentation Form	Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status	Complete - production of the data has been completed Historical archive - data has been stored in an offline storage facility
Data Update Frequency	As needed
Supplemental Information	Acquisition Description: 1) Cruise R/V LM GOULD (LMG1110): Samples collected using Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) with a mouth opening of 1-m2 and nine 335μm mesh nets; upper 200 m were sampled with a 2.3 m2 Isaacs-Kidd Midwater Trawl (IKMT) with a 505 µm mesh net. Western Antarctic Peninsula region, Southern Ocean (November-December 2011) 2) Cruise R/V Polarstern (PS-ANT-XVII/2): Samples collected using a Rectangular Midwater Trawl (RMT 1+8) from the upper 200 m. Western Antarctic Peninsula region, Southern Ocean (January 2011) 3) Cruise R/V Umitaka Maru (UM-08-09): Samples collected using a RMT 1+8 from 2,000 m to surface. Indian Sector, Southern Ocean (January 2009)
Purpose	This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations	accessLevel: Public Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.

Dataset Citation	Cite as: Bucklin, Ann; O'Neill, Rachel J.; Payne, Diana (2023). Salp specimen log for genomic and transcriptomic study collected from ARSV Laurence M. Gould, Umitaka-Maru, R/V Polarstern LMG1110, UM-08-09, ANT-XXVII-2 in the Southern Ocean from 2009-2011 (Salp_Antarctic project) (NCEI Accession 0278872). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278872. Accessed [date].
Cited Authors	Bucklin, Ann University of Connecticut O'Neill, Rachel J. University of Connecticut Payne, Diana Connecticut Sea Grant
Principal Investigators	Ann Bucklin University of Connecticut (UConn) Rachel J. O'Neill University of Connecticut (UConn) Diana Payne Connecticut Sea Grant
Contributors	University of Connecticut (UConn)
Resource Providers	Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Points of Contact	Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Publishers	NOAA National Centers for Environmental Information
Acknowledgments	Funding provided by NSF Antarctic Sciences (NSF ANT) Award Number: ANT-1044982 Award URL: http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1044982

Theme keywords	NODC DATA TYPES THESAURUS SALINITY WATER TEMPERATURE NODC OBSERVATION TYPES THESAURUS physical WMO_CategoryCode oceanography BCO-DMO Standard Parameters count cruise id depth_range depth_w latitude longitude region salinity calculated from CTD primary sensors season station water temperature BODC Parameter Usage Vocabulary Practical salinity of the water body by CTD and computation using UNESCO 1983 algorithm Temperature (ITS-90) of the water body Global Change Master Directory (GCMD) Science Keywords EARTH SCIENCE > OCEANS > OCEAN TEMPERATURE > WATER TEMPERATURE EARTH SCIENCE > OCEANS > SALINITY/DENSITY > SALINITY MEDATLAS Parameter Usage Vocabulary LATITUDE LONGITUDE Originator Parameter Names area cruise_id depth_range depth_w lat lon num_samples region sal season station temp
Data Center keywords	NODC COLLECTING INSTITUTION NAMES THESAURUS University of Connecticut NODC SUBMITTING INSTITUTION NAMES THESAURUS Biological and Chemical Oceanography Data Management Office Global Change Master Directory (GCMD) Data Center Keywords BCO-DMO > Biological and Chemical Oceanography Data Management Office
Platform keywords	NODC PLATFORM NAMES THESAURUS R/V Laurence M. Gould RV Polarstern UMITAKA-MARU BCO-DMO Platform Names ARSV Laurence M. Gould R/V Polarstern Umitaka-Maru Global Change Master Directory (GCMD) Platform Keywords Ships ICES/SeaDataNet Ship Codes LAURENCE M. GOULD (call sign: WCX7445, ICES code: 33LG, 1998) Polarstern (call sign: DBLK, ICES code: 06AQ, 1982) UMITAKA-MARU (ICES code: 49UT)
Instrument keywords	NODC INSTRUMENT TYPES THESAURUS Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) trawl BCO-DMO Standard Instruments Isaacs-Kidd Midwater Trawl MOCNESS1 Midwater Trawl Global Change Master Directory (GCMD) Instrument Keywords MOCNESS > MOCNESS Plankton Net TRAWL Originator Instrument Names 2.3 m2 Isaacs-Kidd Midwater Trawl (IKMT) with a 505 µm mesh net Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) with a mouth opening of 1-m2 and nine 335μm mesh nets Rectangular Midwater Trawl (RMT 1+8)
Place keywords	NODC SEA AREA NAMES THESAURUS Indian Ocean South Atlantic Ocean South Pacific Ocean Southern Ocean Global Change Master Directory (GCMD) Location Keywords OCEAN > ATLANTIC OCEAN > SOUTH ATLANTIC OCEAN OCEAN > INDIAN OCEAN OCEAN > PACIFIC OCEAN > SOUTH PACIFIC OCEAN OCEAN > SOUTHERN OCEAN Provider Place Names Southern Ocean
Project keywords	BCO-DMO Standard Projects Population ecology of Salpa thompsoni based on molecular indicators (Salp_Antarctic) Provider Cruise IDs ANT-XXVII-2 LMG1110 UM-08-09 Provider Funding Award Information Funding provided by NSF Antarctic Sciences (NSF ANT) Award Number: ANT-1044982
Keywords	NCEI ACCESSION NUMBER 0278872

Use Constraints	Cite as: Bucklin, Ann; O'Neill, Rachel J.; Payne, Diana (2023). Salp specimen log for genomic and transcriptomic study collected from ARSV Laurence M. Gould, Umitaka-Maru, R/V Polarstern LMG1110, UM-08-09, ANT-XXVII-2 in the Southern Ocean from 2009-2011 (Salp_Antarctic project) (NCEI Accession 0278872). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278872. Accessed [date].
Data License	This dataset is licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) License. SPDX License: Creative Commons Attribution 4.0 International (CC-BY-4.0)
Access Constraints	Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees	In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.

Lineage information for: dataset
Processing Steps	2023-05-28T05:04:26Z - NCEI Accession 0278872 v1.1 was published.
Output Datasets	NCEI Accession 0278872 v1.1 NCEI Accession 0278872 v1.1 (download) published 2023-05-28T05:04:26Z

Acquisition Information (collection)
Instrument	Multiple Opening/Closing Net and Environmental Sensing System (MOCNESS) trawl
Platform	R/V Laurence M. Gould RV Polarstern UMITAKA-MARU

Last Modified: 2024-05-31T15:15:28Z
For questions about the information on this page, please email: ncei.info@noaa.gov

Salp specimen log for genomic and transcriptomic study collected from ARSV Laurence M. Gould, Umitaka-Maru, R/V Polarstern LMG1110, UM-08-09, ANT-XXVII-2 in the Southern Ocean from 2009-2011 (Salp_Antarctic project) (NCEI Accession 0278872)

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