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Total dissolved cobalt and labile cobalt concentrations from the US GEOTRACES EPZT cruise TN303 on R/V Thomas G. Thompson from October to December 2013 (NCEI Accession 0278854)

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This dataset contains chemical and physical data collected on R/V Thomas G. Thompson during cruise TN303 in the South Pacific Ocean from 2013-10-29 to 2013-12-16. These data include depth, depth_bottom, trace metal concentration, and water pressure. The instruments used to collect these data include GO-FLO Bottle, GeoFish Towed near-Surface Sampler, and Metrohm 663 VA Stand mercury electrode. These data were collected by Mak A. Saito of Woods Hole Oceanographic Institution as part of the "U.S. GEOTRACES East Pacific Zonal Transect (U.S. GEOTRACES EPZT)" and "US GEOTRACES Pacific Section: Measurement of the organic complexation of dissolved iron, copper and cobalt, and total dissolved cobalt (EPZT Fe Cu Co)" projects and "U.S. GEOTRACES (U.S. GEOTRACES)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2020-09-03.

The following is the text of the dataset description provided by BCO-DMO:

Total dissolved cobalt and labile cobalt concentrations measured by cathodic stripping voltammetry.

Dataset Description:
Total dissolved cobalt and labile cobalt concentrations measured by cathodic stripping voltammetry. Samples were collected on the 2013 U.S. GEOTRACES East Pacific Zonal Transect (EPZT) cruise (TN303).
  • Cite as: Saito, Mak A. (2023). Total dissolved cobalt and labile cobalt concentrations from the US GEOTRACES EPZT cruise TN303 on R/V Thomas G. Thompson from October to December 2013 (NCEI Accession 0278854). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278854. Accessed [date].
gov.noaa.nodc:0278854
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2013-10-29 to 2013-12-16
Spatial Bounding Box Coordinates
West: -152.12
East: -77.376
South: -16
North: -10.219
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
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  • Saito, M. A. (2016) Total dissolved cobalt and labile cobalt concentrations from the US GEOTRACES EPZT cruise TN303 on R/V Thomas G. Thompson from October to December 2013. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2) Version Date 2016-07-01. https://doi.org/10.26008/1912/bco-dmo.642974.2
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2023-05-28
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
Samples were collected using the ODU GEOTRACES Carousel (GT-C), filtered through 0.2 um Acropak filters in the GEOTRACES clean van and immediately refrigerated. Acid-washed 60 mL LDPE bottles were filled entirely, leaving no headspace. Samples were either stored at 4 degrees C, double-bagged, prior until analysis at sea, or preserved in a heat-sealed bag containing gas absorbing satchels immediately after sample collection and kept at 4 degrees C until analysis in lab. Both labile and total dissolved cobalt were analyzed from this sample bottle, identified by its GEOTRACES number.

The carousel was used to collect samples from surface to near bottom waters. An additional sample was collected from a surface towfish at each station. Pre-conditioned, teflon-coated 12L Go-Flo sampling bottles (General Oceanics, Miami, FL) were deployed on a polyurethane powder-coated aluminum rosette with titanium pilings and pressure housings (Sea-Bird Electronics, Inc., Bellevue, WA) attached to a Kevlar, non-metallic conducting cable. For more information regarding carousel deployment, please refer to the GEOTRACES Cookbook (www.geotraces.org/science/intercalibration/222-sampling-and-sample-handling-protocols-for-geotraces-cruises), located on the GEOTRACES Program website (www.geotraces.org/). Following carousel retrieval, Go-Flo bottles were moved to the GEOTRACES Program class-100 trace metal clean van, and pressurized with HEPA filtered air for sampling in accordance with published methods (Cutter and Bruland 2012). Surface towfish samples were collected by suspending the towfish off the starboard side with a boom, and sampled water at approximately 2 m depth using a Teflon diaphragm pump following the GEOTRACES Program Cookbook sampling recommendations, and in accordance with previous collection protocols (Bruland et al. 2004).

Sample storage and reagent bottles were soaked for >1 week in the acidic detergent Citranox, rinsed thoroughly with 18.2 M-Ohm Milli-Q water (Millipore), filled with 10% HCl to soak for 10 days, and rinsed thoroughly with Milli-Q water adjusted to pH 2 with TM-grade HCl. Reagent purification protocols were identical to those previously published (Saito and Moffett 2001).

Concentrations of total dissolved cobalt and labile cobalt during the TN303 cruise were determined ship-board using a previously described cathodic stripping voltammetry (CSV) method (Saito and Moffett 2001, Saito et al. 2004). Measurements were made using the Eco-Chemie µAutolabIII systems connected to Metrohm 663 VA Stands equipped with hanging mercury drop electrodes and Teflon sampling cups. Sample preparation was modified slightly to accommodate use of a Metrohm 837 Sample processor, operated with NOVA 1.8 software (Metrohm Autolab B.V.).

For total dissolved cobalt analyses , samples were UV-irradiated for 1 h prior to analysis in a Metrohm 705 UV digester to degrade the organic ligands that bind cobalt, enabling full chelation by the added electroactive ligand, dimethylglyoxime (DMG). 11 ml of sample was pipetted into 15ml polypropylene tubes. Recrystallized DMG (0.1M in methanol) was added to a final concentration of 400 uM and purified N-(2-hydroxyethyl)piperazine-N-(3-propanesulfonic acid) (EPPS) buffer (0.5 M in Milli-Q water) was added to a final concentration of 3.8 mM. Tubes were inverted several times before being placed in the autosampler queue, where 8.5 ml of the mixture was dosed into the teflon analysis cup using a 800 Dosino automated burrette (Metrohm). 1.5 ml of purified sodium nitrite (1.5M in Milli-Q water) was added directly to the Teflon cup using a dedicated 800 Dosino burrette. Once loaded, samples were purged with high purity (>99.99%) N2 for 3 min and cobalt concentrations were determined by standard addition, with triplicate measurement of the sample followed by four 25 pM cobalt additions. 5 nM Co stock was diluted from a certified 1ppm reference (SPEX) and added to the analysis cup via a third Dosino burrette.

For labile cobalt analyses , 11 ml of sample were pipetted into acid washed teflon vials, preconditioned with a small aliquot of sample water. DMG was added to a concentration of 400 uM and allowed to equilibrate for 8-16hr in the dark prior to analysis (Saito et al. 2004). EPPS was added just prior to measurement using the same standard addition protocol described above. Previously, we determined that natural cobalt ligands in seawater have a conditional stability constant of >10^16.8 (Saito et al. 2005). This suggests that the cobalt is very strongly bound to ligands. Thus, we define labile cobalt as the fraction of total dissolved cobalt that is either bound to weak organic and inorganic ligands in seawater or present as free Co(II), and is then exchangeable with the complexing agent (DMG) used for analysis (Saito et al. 2004, Saito et al. 2005). The difference between the total dissolved cobalt and the labile cobalt can then be used as an estimation of the strong cobalt ligand concentration. The same electrode was used for both total and labile analyses. Before transitioning from labile analyses to total analyses, the autosampler tubing and Teflon cup were rinsed with Milli-Q water and pH2 HCl in Milli-Q water.

The analytical blank was determined by analyzing seawater that had been UV-irradiated for 1 h, equilibrated overnight with prepared Chelex 100 resin beads (Bio-Rad), and UV-irradiated a second time to degrade any leached synthetic ligands. Mean blank for at sea analysis was 3.7 +/- 1.2 pM (n=28), indicating a detection limit of 3.6 pM. For in lab analyses, mean blank was 4.7 +/- 1.4 pM, and the detection limit was 4.2 pM.

GEOTRACES standard seawater and internal standard lab seawater were analyzed periodically. A large batch of UV oligotrophic seawater was generated prior to the cruise and used as a primary standard during at sea analysis. This standard seawater was run ~3x per week, as were blanks, and values were consistent for the duration of the cruise. Our laboratory has participated in the GEOTRACES intercalibration effort using this electrochemical Co method. Acidified standards were neutralized with concentrated ammonium hydroxide (Seastar), mixing the entire sample between drops, prior to UV digestion. We report our laboratory values for the GEOTRACES and SAFe standard analyses using this electrochemical method, including those conducted during analysis of the EPZT samples to be: SAFe D1 = 48.5 +/- 2.4 (n=3, at sea), SAFe D2 = 45.0 +/- 2.7 (n=7), GEOTRACES GSP = 2.5 +/- 2.0 (n=10), GEOTRACES GSC = 77.7 +/- 2.4 (n=4). These results are in good agreement with those from the GEOTRACES intercalibration effort for Co and demonstrate that the methodologies employed to produce this dataset detect concentrations within the standard deviation of current consensus values for UV irradiated samples, which can be found on the International GEOTRACES Program website (www.geotraces.org/).
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
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Dataset Citation
  • Cite as: Saito, Mak A. (2023). Total dissolved cobalt and labile cobalt concentrations from the US GEOTRACES EPZT cruise TN303 on R/V Thomas G. Thompson from October to December 2013 (NCEI Accession 0278854). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278854. Accessed [date].
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords NODC PLATFORM NAMES THESAURUS BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords ICES/SeaDataNet Ship Codes
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Originator Instrument Names
Place keywords NODC SEA AREA NAMES THESAURUS Global Change Master Directory (GCMD) Location Keywords Provider Place Names
Project keywords NODC PROJECT NAMES THESAURUS BCO-DMO Standard Programs BCO-DMO Standard Projects Global Change Master Directory (GCMD) Project Keywords Provider Cruise IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Saito, Mak A. (2023). Total dissolved cobalt and labile cobalt concentrations from the US GEOTRACES EPZT cruise TN303 on R/V Thomas G. Thompson from October to December 2013 (NCEI Accession 0278854). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278854. Accessed [date].
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  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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Lineage information for: dataset
Processing Steps
  • 2023-05-28T04:39:31Z - NCEI Accession 0278854 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • bottle
Platform
  • R/V THOMAS G. THOMPSON
Last Modified: 2024-05-31T18:50:46Z
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