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Dataset Overview | National Centers for Environmental Information (NCEI)

Cellular trace elements collected on cruise TN280 (GeoMICS project) along Line P in the NE Pacific in May 2012 (NCEI Accession 0278711)

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This dataset contains chemical and physical data collected on R/V Thomas G. Thompson during cruise TN280 in the North Pacific Ocean on 2021-02-24. These data include Carbon, Iron, Manganese, Silicon, and depth. The instruments used to collect these data include GO-FLO Bottle, Trace Metal Bottle, and X-ray fluorescence analyzer. These data were collected by Benjamin Twining of Bigelow Laboratory for Ocean Sciences as part of the "Characterizing biological function across a persistent oceanographic "hotspot" in the NE Pacific Ocean (GeoMICS Bio)" and "The relationship between microbial biogeography and ocean chemistry across a persistent oceanographic "hot spot" in the NE Pacific Ocean (GeoMICS Chem)" projects and "GeoMICS (GeoMICS)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2021-05-18.

The following is the text of the dataset description provided by BCO-DMO:

Cellular trace elements from TN280

Dataset Description:
Acquisition Description:
Samples were collected with trace-metal clean rosette and GO-FLO bottles. A small aliquot of unfiltered seawater was collected following protocols described in Twining et al. (2015). Cellular metals were analyzed with the 2-ID-E microprobe beamline at the Advanced Photon Source, Argonne National Laboratory. Incident beam energy was 10 keV to enable the excitation of K α fluorescence for elements ranging in atomic number from Si (14) to Zn (30). Element quantification was performed by averaging the spectra from pixels representing the cells of interest. Spectra were also extracted from a background area close to each cell. The spectra were then fit with MAPS, a custom fitting software package (Vogt, 2003). Concentrations were calculated based on conversion factors obtained by running the thin-film standards NBS 1832, NBS 1833, and custom Si, P, and Fe standards made by Micromatter XRF. Cell volume was calculated based on measurements taken from bright field images of the cells and using the equations of Hillebrand et al. (1999). Cellular C was then calculated from the volumes using the equations described in Menden-Deuer and Lessard (2000).

Complete methodology is published in Twining et al. (2020).
  • Cite as: Twining, Benjamin (2023). Cellular trace elements collected on cruise TN280 (GeoMICS project) along Line P in the NE Pacific in May 2012 (NCEI Accession 0278711). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278711. Accessed [date].
gov.noaa.nodc:0278711
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  • TSV
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2021-02-24 to 2021-02-24
Spatial Bounding Box Coordinates
West: -128.67
East: -125.5
South: 48.58
North: 48.82
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
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  • Twining, B. (2021) Cellular trace elements collected on cruise TN280 (GeoMICS project) along Line P in the NE Pacific in May 2012. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2021-02-24. https://doi.org/10.26008/1912/bco-dmo.841640.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2023-05-25
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Twining, Benjamin (2023). Cellular trace elements collected on cruise TN280 (GeoMICS project) along Line P in the NE Pacific in May 2012 (NCEI Accession 0278711). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278711. Accessed [date].
Cited Authors
Principal Investigators
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Acknowledgments
Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords NODC PLATFORM NAMES THESAURUS BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords ICES/SeaDataNet Ship Codes
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Originator Instrument Names
Place keywords NODC SEA AREA NAMES THESAURUS Global Change Master Directory (GCMD) Location Keywords Provider Place Names
Project keywords BCO-DMO Standard Programs BCO-DMO Standard Projects Provider Cruise IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Twining, Benjamin (2023). Cellular trace elements collected on cruise TN280 (GeoMICS project) along Line P in the NE Pacific in May 2012 (NCEI Accession 0278711). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278711. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2023-05-25T04:22:22Z - NCEI Accession 0278711 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • bottle
Platform
  • R/V THOMAS G. THOMPSON
Last Modified: 2024-05-31T18:50:46Z
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