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Net calcification of L. pertusa specimens exposed to different pH treatments collected on NOAA Ship Ronald H. Brown in Florida from 2010-10 to 2010-11 (Lophelia OA project) (NCEI Accession 0278517)

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This dataset contains biological, chemical, and physical data collected on NOAA Ship Ronald H. Brown during cruise RB1007 at Florida on 2016-09-19. These data include Aragonite Saturation State, growth, pH, salinity calculated from CTD primary sensors, and total alkalinity. The instruments used to collect these data include Aquarium, Scale, and Water Temperature Sensor. These data were collected by Dr Erik E. Cordes of Temple University as part of the "Physiological and genetic responses of the deep-water coral, Lophelia pertusa, to ongoing ocean acidification in the Gulf of Mexico (Lophelia OA)" project and "Science, Engineering and Education for Sustainability NSF-Wide Investment (SEES): Ocean Acidification (formerly CRI-OA) (SEES-OA)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2019-05-13.

The following is the text of the dataset description provided by BCO-DMO:

Net calcification of L. pertusa exposed to different pH treatments.

Dataset Description:
Net calcification data (percent total weight per day) for Lophelia pertusa exposed to different pH treatments. Specimens used in this experiment were collected on RB-10-07: NOAA Ship Ronald H. Brown, from October-November 2010.
  • Cite as: Cordes, Erik E. (2023). Net calcification of L. pertusa specimens exposed to different pH treatments collected on NOAA Ship Ronald H. Brown in Florida from 2010-10 to 2010-11 (Lophelia OA project) (NCEI Accession 0278517). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278517. Accessed [date].
gov.noaa.nodc:0278517
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Distributor NOAA National Centers for Environmental Information
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Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Coverage Description Florida
Time Period 2016-09-19 to 2016-09-19
Spatial Bounding Box Coordinates
West:
East:
South:
North:
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • Cordes, E. (2016) Net calcification of L. pertusa specimens exposed to different pH treatments collected on R/V Ronald Brown in Florida from October to November 2010 (Lophelia OA project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2016-09-19. https://doi.org/10.1575/1912/bco-dmo.659109.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2023-05-20
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
All methods are fully described in:

Lunden et al. 2014 Frontiers in Marine Science “Acute survivorship of the deep-sea coral Lophelia pertusa from the Gulf of Mexico under acidification, warming, and deoxygenation”

From the Paper:

Forty-one nubbins of L. pertusa used in the experiments were collected in November 2010 on the NOAA Ship Ronald H. Brown with ROV Jason II as part of the “Lophelia II” project jointly sponsored by the Bureau of Ocean Energy Management and the NOAA Office of Ocean Exploration and Research in the Gulf of Mexico (GoM). Permits for the collection of corals were obtained from the U.S. Department of the Interior prior to any collection activities. Spatially discrete coral branches were collected with the ROV and placed in temperature-insulated bioboxes (volume = 20 l) at depth. Upon return to the surface, corals were kept alive in 20 l aquaria in the ship’s constant-temperature room. Partial water changes were made regularly while at sea. Upon return to port, corals were immediately transported overnight to the laboratory on wet ice.

In the laboratory, corals were maintained in one of two 570 liter recirculating aquaria systems at temperature 8 degrees celsius and salinity 35 ppt (Lunden et al., 2014). Regular partial water changes (15–20%) were performed with seawater made using Instant Ocean sea salt. Submersible power heads were placed in each holding tank to ensure water movement and turbulence sufficient to cause swaying of coral polyps. Corals were fed three times weekly using a combination of MarineSnow PlanktonDiet (Two Little Fishies, Miami Gardens, FL) and freshly hatched Artemia nauplii.

Survivorship was assessed by daily observations of polyp tissue presence and behavior. Final survivorship counts were taken 3 to 4 days following the end of each treatment after transfer to the maintenance tank. Survivorship is reported as percent cumulative mortality.

Net calcification was measured using the buoyant weight technique (Davies, 1989). Coral nubbins were buoyantly weighed at the start and end of each experimental period (days eight and fifteen) using a Denver Instruments SI-64 analytical balance (d = 0.1mg, Fisher Scientific, Waltham, MA). A weighing chamber was constructed using 1/2” plexiglass to prevent disturbances from air movement during weighing. Each coral nubbin was transported individually from its respective aquarium to the weighing chamber in a four-liter Pyrex beaker and suspended from the balance. The buoyant weight was recorded after the coral nubbin stabilized, typically 2 min. Each coral nubbin was weighed three times to determine measurement precision (2–3 mg). Seawater density was determined in each aquarium by buoyantly weighing a 2.5 cm^2 aluminum block with known density (2.7 g/cm^−3). Coral weight in air (i.e., dry weight) was calculated by the following equation:

Wa = Ww / (1− (Dw/SD))

Where
Wa = coral weight in air (dry weight)
Ww = coral weight in water (buoyant weight)
Dw = density of seawater
SD = coral skeletal density (= 2.82 g/cm^−3, Lunden et al., 2013).

Coral growth rate is reported as percent growth per day (%/d−1), which was calculated by the equation:

Gt = 100 × (Mt2 − Mt1)/(Mt1(T2 −T1))

Where
Gt =growth rate as %/d^−1
Mt2 = mass (mg, dry weight) at time 2 (end of experimental period, day 15)
Mt1= mass (mg, dry weight) at time 1 (start of experimental period, day 8)
T2 = time 2 (end of experimental period, day 15)
T1= time 1 (start of experimental period, day 8)
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Cordes, Erik E. (2023). Net calcification of L. pertusa specimens exposed to different pH treatments collected on NOAA Ship Ronald H. Brown in Florida from 2010-10 to 2010-11 (Lophelia OA project) (NCEI Accession 0278517). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278517. Accessed [date].
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords NODC PLATFORM NAMES THESAURUS BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords ICES/SeaDataNet Ship Codes
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Place keywords Provider Place Names
Project keywords BCO-DMO Standard Programs BCO-DMO Standard Projects Provider Cruise IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Cordes, Erik E. (2023). Net calcification of L. pertusa specimens exposed to different pH treatments collected on NOAA Ship Ronald H. Brown in Florida from 2010-10 to 2010-11 (Lophelia OA project) (NCEI Accession 0278517). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278517. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2023-05-20T05:20:17Z - NCEI Accession 0278517 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • scale
  • temperature sensor
Platform
  • NOAA Ship Ronald H. Brown
Last Modified: 2024-05-31T18:50:46Z
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