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Particle d15N values of amino acids from EXPORTS cruises SR1812 on R/V Sally Ride and RR1813 on R/V Roger Revelle in August to September 2018 (NCEI Accession 0278492)

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This dataset contains chemical data collected on R/V Roger Revelle and R/V Sally Ride during cruises RR1813 and SR1812 from 2018-08-15 to 2018-09-05. These data include d15N and depth. The instruments used to collect these data include Gas Chromatograph, Isotope-ratio Mass Spectrometer, McLane Large Volume Pumping System WTS-LV, Multiple Unit Large Volume Filtration System, Neutrally Buoyant Sediment Trap, and Sediment Trap. These data were collected by Brian N. Popp of University of Hawaii at Manoa and Hilary G. Close of University of Miami Rosenstiel School of Marine and Atmospheric Science as part of the "Collaborative Research: Isotopic Indicators for Mechanisms of Organic Matter Degradation in the Northeast Pacific (EXPORTS) (EXPORTS Isotopes)" project and "EXport Processes in the Ocean from Remote Sensing (EXPORTS)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2022-09-30.

The following is the text of the dataset description provided by BCO-DMO:

Particle d15N values of amino acids

Dataset Description:
Acquisition Description:
In situ pump filtration was performed using large volume pumps (WTS-LV; McLane Research Laboratories, Inc.) outfitted with mini-MULVFS (Multiple Unit Large Volume in-situ Filtration System) filter holders (Bishop et al. 2012). Pumps were loaded with filter stacks of either 3 filter pore sizes (51- and 5-um acid cleaned Nitex screens and 1 um pre-combusted quartz fiber filter) or 4 filter pore sizes (51- and 6-um acid cleaned Nitex screens, a double layer of 1 um pre-combusted quartz fiber filters, and a double layer of 0.3 um of pre-combusted glass fiber filters). Samples were frozen at -80 degrees Celsius until laboratory analysis. Sediment trap collection was performed using surface tethered sediment traps (STT) and neutrally buoyant sediment traps (NBST). Particles were collected in polycarbonate tubes with a collection area of 0.0113 m² and triggered to close at the end of the sampling period. Samples were collected in 500 mL of 70 ppt salinity, 0.1% formaldehyde-poisoned brine, buffered to pH 8.5 with borate and overlain with 1‑um filtered surface seawater. After collection and allowing particles to sink to the bottom of the tube on board the ship for an hour, brine was filtered through a 335‑um polyester screen and rotary wet split onto pre-combusted glass fiber filters with a pore size of 0.7 um. Samples were frozen at -80 degrees Celsius until laboratory analysis.

6 um and 51 um Nitex filters were washed down onto 0.7 um GFFs and inspected using a dissecting microscope, removing foreign (non-natural) material. Samples were freeze-dried and then stored at -20 degrees Celsius for the remainder of preparation. Samples were hydrolyzed using 6N HCl at 110 degrees Celsius for 20 hours, filtered, purified (to remove organic molecules other than amino acids and amino acid like molecules) using cation exchange chromatography. Amino acids in samples were derivatized to their isopropyl ester-trifluoroacetyl derivatives in a two-step derivatization: esterification with 4:1 isopropanol:acetyl chloride (110 degrees C, 60 minutes) and acetylation with 3:1 dichloromethane:trifluoroacetic anhydride (100 degrees C, 15 minutes), with the headspace exacuated with N₂ prior to each reaction. They were de-salted using phosphate buffer and chloroform and then re-acetylated. The solvent was exchanged for ethyl acetate immediately prior to analysis.

Analyses were carried out using a Thermo Fisher Scientific Trace 1310 Gas Chromatograph (GC) coupled to a MAT 253 Plus Isotope Ratio Mass Spectrometer (IRMS) through a Thermo Fisher GC Isolink II system with a combined oxidation/reduction reactor held at 1000 degrees C, a liquid nitrogen trap, and a Conflo IV open split interface.
  • Cite as: Close, Hilary G.; Popp, Brian N. (2023). Particle d15N values of amino acids from EXPORTS cruises SR1812 on R/V Sally Ride and RR1813 on R/V Roger Revelle in August to September 2018 (NCEI Accession 0278492). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278492. Accessed [date].
gov.noaa.nodc:0278492
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Distributor NOAA National Centers for Environmental Information
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NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2018-08-15 to 2018-09-05
Spatial Bounding Box Coordinates
West: -145.297716
East: -144.80516
South: 50.046084
North: 50.672621
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • Wojtal, P. K., Popp, B. N., Close, H. G. (2022) Particle d15N values of amino acids from EXPORTS cruises SR1812 on R/V Sally Ride and RR1813 on R/V Roger Revelle in August to September 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2022-09-12. https://doi.org/10.26008/1912/bco-dmo.880041.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2023-05-20
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Close, Hilary G.; Popp, Brian N. (2023). Particle d15N values of amino acids from EXPORTS cruises SR1812 on R/V Sally Ride and RR1813 on R/V Roger Revelle in August to September 2018 (NCEI Accession 0278492). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278492. Accessed [date].
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords NODC PLATFORM NAMES THESAURUS BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords ICES/SeaDataNet Ship Codes
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Place keywords Provider Place Names
Project keywords BCO-DMO Standard Programs BCO-DMO Standard Projects Provider Cruise IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Close, Hilary G.; Popp, Brian N. (2023). Particle d15N values of amino acids from EXPORTS cruises SR1812 on R/V Sally Ride and RR1813 on R/V Roger Revelle in August to September 2018 (NCEI Accession 0278492). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278492. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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Lineage information for: dataset
Processing Steps
  • 2023-05-20T04:11:27Z - NCEI Accession 0278492 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • chromatograph
  • mass spectrometer
  • trap - sediment
Platform
  • R/V Roger Revelle
  • R/V Sally Ride
Last Modified: 2024-05-31T15:15:28Z
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