Dataset Overview | National Centers for Environmental Information (NCEI)

Survey biogeochemical data from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 (NCEI Accession 0278182)

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This dataset contains biological, chemical, optical, and physical data collected on R/V Atlantis during cruises AT32, AT34, AT38, and AT39-06 in the North Atlantic Ocean from 2015-11-12 to 2018-04-05. These data include Oxygen in volts, Total Dissolved Nitrogen, bacterial abundance, beam attenuation, conductivity, density, depth nominal, dissolved Oxygen, dissolved organic Carbon, fluorescence, leucine incorporation rate, salinity calculated from CTD primary sensors, sound velocity, total organic Carbon, turbidity, water pressure, and water temperature. The instruments used to collect these data include Centrifuge, Flow Cytometer, Fluorescence Microscope, GO-FLO Bottle, High Performance Liquid Chromatograph, Liquid Scintillation Counter, Niskin bottle, and Shimadzu TOC-V Analyzer. These data were collected by Craig Carlson of University of California-Santa Barbara as part of the "Tracking the temporal and spatial variability of dissolved organic matter, its diagenetic state and bioavailability during various bloom states in the North Atlantic (DOM_SeasonalDynamics)" project and "North Atlantic Aerosols and Marine Ecosystems Study (NAAMES)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2020-09-21.

The following is the text of the dataset description provided by BCO-DMO:

Biogeochemical data from cruises AT32, AT34, AT38, AT39-06

Dataset Description:
This dataset includes analyses from Niskin bottle samples collected on R/V Atlantis cruises AT32, AT34, AT38 and AT39-6 as part of the NASA NAAMES campaign (2015-2018). Reported are survey biogeochemical including dissolved organic carbon, dissolved organic nitrogen, total dissolved amino acids.

Dataset Citation

Cite as: Carlson, Craig (2023). Survey biogeochemical data from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 (NCEI Accession 0278182). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278182. Accessed [date].

Dataset Identifiers

ISO 19115-2 Metadata

gov.noaa.nodc:0278182

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Download Data	HTTPS (download) Navigate directly to the URL for data access and direct download. FTP (download) These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
Distribution Formats	TSV
Ordering Instructions	Contact NCEI for other distribution options and instructions.
Distributor	NOAA National Centers for Environmental Information +1-301-713-3277 NCEI.Info@noaa.gov
Dataset Point of Contact	NOAA National Centers for Environmental Information ncei.info@noaa.gov

Time Period	2015-11-12 to 2018-04-05
Spatial Bounding Box Coordinates	West: -46.148 East: -37.514 South: 39.187 North: 56.341
Spatial Coverage Map

General Documentation

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Descriptive Information
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Associated Resources

Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
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Carlson, C. (2020) Survey biogeochemical data from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 2) Version Date 2020-09-14. https://doi.org/10.26008/1912/bco-dmo.659131.2
- https://doi.org/10.26008/1912/bco-dmo.659131.2 (download)
  originator dataset

gov.noaa.nodc:BCO-DMO

Publication Dates	publication: 2023-05-14
Data Presentation Form	Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status	Complete - production of the data has been completed Historical archive - data has been stored in an offline storage facility
Data Update Frequency	As needed
Supplemental Information	Acquisition Description: Samples were collected on RV/Atlantis cruises in the North Atlantic between November 2015 and April 2018. Bacterial abundance was determined by flow cytometry on AT32 and by direct microscope counts for the rest of the cruises (AT34, AT38, AT39-6). Amino acid analysis was conducted for cruises AT34, AT38, and AT39-06. Dissolved organic carbon DOC) and total dissolved nitrogen (TDN) : See Supplemental Files. Carlson C, Hansell D, Nelson N, Siegel D, Smethie W, Khatiwala S et al. (2010). Dissolved organic carbon export and subsequent remineralization in the mesopelagic and bathypelagic realms of the North Atlantic basin. Deep Sea Res Part II: Topical Stud Oceanogr 57: 1433–1445. Bacterial production by Leucine Incorporation: See Supplemental Files. Smith, D.C. and F. Azam (1992). A simple, economical method for measuring bacterial protein synthesis rates in seawater using 3H-leucine. Marine Microbial Food Webs 6:107-114. Bacterioplankton abundance by flow cytometry : See Supplemental Files. Nelson, C.E., A.L. Alldredge, E.A. McCliment, L.A. Amaral-Zettler, and C.A. Carlson. 2011. Depleted dissolved organic carbon and distinct Bacterial communities in the water column of a rapid-flushing coral reef ecosystem. The ISME Journal 5: 1374–1387. doi:10.1038/ismej.2011.12 Bacterioplankton abundance by DAPI DNA binding stain and epifluorescence microscopy : See Supplemental Files. BATS Methods Manual. Chapter 17. Determination of Bacterial Abundance.Updated by K.Orcutt 4/1997, pp. 111-114.version 4. Amino acid concentration using HPLC : See Supplemental Files (includes reference list.)
Purpose	This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations	accessLevel: Public Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.

Dataset Citation	Cite as: Carlson, Craig (2023). Survey biogeochemical data from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 (NCEI Accession 0278182). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278182. Accessed [date].
Cited Authors	Carlson, Craig University of California-Santa Barbara
Principal Investigators	Craig Carlson University of California - Santa Barbara (UCSB)
Contributors	University of California - Santa Barbara (UCSB)
Resource Providers	Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Points of Contact	Biological and Chemical Oceanography Data Management Office (BCO-DMO)
Publishers	NOAA National Centers for Environmental Information
Acknowledgments	Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1537943 Award URL: http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=1537943

Theme keywords	NODC DATA TYPES THESAURUS BACTERIA - BACTERIAL DENSITY BEAM ATTENUATION COEFFICIENT CARBON - TOTAL ORGANIC CONDUCTIVITY DEPTH - OBSERVATION DISSOLVED ORGANIC CARBON DISSOLVED OXYGEN FLUORESCENCE HYDROSTATIC PRESSURE leucine OXYGEN SALINITY SOUND VELOCITY Total Dissolved Nitrogen (TDN) turbidity WATER DENSITY WATER TEMPERATURE NODC OBSERVATION TYPES THESAURUS biological chemical optical physical WMO_CategoryCode oceanography BCO-DMO Standard Parameters ISO_DateTime_UTC Oxygen in volts Total Dissolved Nitrogen amino acid concentration bacterial abundance beam attenuation bottle cast cast type conductivity cruise id density depth nominal depth_w dissolved Oxygen dissolved organic Carbon file_name flag fluorescence latitude leucine incorporation rate longitude salinity calculated from CTD primary sensors sample type sound velocity station total organic Carbon transmission turbidity water pressure water temperature Global Change Master Directory (GCMD) Science Keywords EARTH SCIENCE > OCEANS > OCEAN ACOUSTICS > ACOUSTIC VELOCITY EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > NITROGEN EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > ORGANIC CARBON EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY > OXYGEN EARTH SCIENCE > OCEANS > OCEAN OPTICS > ATTENUATION/TRANSMISSION EARTH SCIENCE > OCEANS > OCEAN OPTICS > FLUORESCENCE EARTH SCIENCE > OCEANS > OCEAN OPTICS > TURBIDITY EARTH SCIENCE > OCEANS > OCEAN PRESSURE > WATER PRESSURE EARTH SCIENCE > OCEANS > OCEAN TEMPERATURE > WATER TEMPERATURE EARTH SCIENCE > OCEANS > SALINITY/DENSITY > CONDUCTIVITY EARTH SCIENCE > OCEANS > SALINITY/DENSITY > DENSITY EARTH SCIENCE > OCEANS > SALINITY/DENSITY > SALINITY Originator Parameter Names Ala Arg Asp BactAbund BactAbund_QF BactAbund_sd BactProd BactProd_QF BactProd_sd Bala BeamAt BeamT Bottom_Z CampCN Cast_Type Conductivity Conductivity1 Cruise CruiseCN DOC DOC_QF DOC_sd Density00 Density11 Fluorescence GABA Glu Gly His Ile Latitude Leu Longitude Lys Met Niskin Oxygen_V Oxygen_uM Phe Pressure SCN Sal11 Ser SoundVel SoundVel1 Station TDAA TDAA_QF TDAA_sd TDN TDN_QF TDN_sd TOC TOC_QF TOC_sd Target_Z Tau Temperature Temperature1 Thr Time_Stamp Turbidity Type Tyr Val file_name
Data Center keywords	NODC COLLECTING INSTITUTION NAMES THESAURUS University of California - Santa Barbara NODC SUBMITTING INSTITUTION NAMES THESAURUS Biological and Chemical Oceanography Data Management Office Global Change Master Directory (GCMD) Data Center Keywords BCO-DMO > Biological and Chemical Oceanography Data Management Office
Platform keywords	NODC PLATFORM NAMES THESAURUS R/V Atlantis BCO-DMO Platform Names R/V Atlantis Global Change Master Directory (GCMD) Platform Keywords Ships ICES/SeaDataNet Ship Codes ATLANTIS (call sign: KAQP, ICES code: 33AT, 1997)
Instrument keywords	NODC INSTRUMENT TYPES THESAURUS bottle chromatograph Flow Cytometer fluorescence microscope scintillation counter BCO-DMO Standard Instruments Centrifuge Flow Cytometer Fluorescence Microscope GO-FLO Bottle High Performance Liquid Chromatograph Liquid Scintillation Counter Niskin bottle Shimadzu TOC-V Analyzer Global Change Master Directory (GCMD) Instrument Keywords FLOW CYTOMETRY FLUORESCENCE MICROSCOPY > FLUORESCENCE MICROSCOPY GAS CHROMATOGRAPHS > GAS CHROMATOGRAPHS SCINTILLATION COUNTERS > SCINTILLATION COUNTERS Originator Instrument Names BD LSR II equipped with a BD High Throughput Sampler (HTS) - Biosciences, San Jose, CA, USA Dionex ICS 5000+ Hidex 300 Liquid Scintillation Analyzer Olympus BX51 Epiflourescence Microscope unknown (Centrifuge) unknown (GO-FLO Bottle) unknown (Niskin bottle) unknown (Shimadzu TOC-V Analyzer)
Place keywords	NODC SEA AREA NAMES THESAURUS North Atlantic Ocean Global Change Master Directory (GCMD) Location Keywords OCEAN > ATLANTIC OCEAN > NORTH ATLANTIC OCEAN Provider Place Names N. Atlantic NW Atlantic North Atlantic Ocean (35°N to 57°N; 45°W) North Atlantic Ocean (42°N to 54°N; 39-45°W)
Project keywords	BCO-DMO Standard Programs North Atlantic Aerosols and Marine Ecosystems Study (NAAMES) BCO-DMO Standard Projects Tracking the temporal and spatial variability of dissolved organic matter, its diagenetic state and bioavailability during various bloom states in the North Atlantic (DOM_SeasonalDynamics) Provider Cruise IDs AT32 AT34 AT38 AT39-06 Provider Funding Award Information Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-1537943
Keywords	NCEI ACCESSION NUMBER 0278182

Use Constraints	Cite as: Carlson, Craig (2023). Survey biogeochemical data from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 (NCEI Accession 0278182). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278182. Accessed [date].
Data License	This dataset is licensed under a Creative Commons Attribution 4.0 International (CC BY 4.0) License. SPDX License: Creative Commons Attribution 4.0 International (CC-BY-4.0)
Access Constraints	Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees	In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.

Lineage information for: dataset
Processing Steps	2023-05-14T04:30:31Z - NCEI Accession 0278182 v1.1 was published.
Output Datasets	NCEI Accession 0278182 v1.1 NCEI Accession 0278182 v1.1 (download) published 2023-05-14T04:30:31Z

Acquisition Information (collection)
Instrument	bottle chromatograph Flow Cytometer fluorescence microscope scintillation counter
Platform	R/V Atlantis

Last Modified: 2024-05-31T15:15:28Z
For questions about the information on this page, please email: ncei.info@noaa.gov

Survey biogeochemical data from R/V Atlantis AT32, AT34, AT38, and AT39-06 in the western North Atlantic Ocean (35°N to 57°N; 45°W) in Nov. 2015, May 2016, Sep 2017, Mar/Apr 2018 (NCEI Accession 0278182)

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