Presence/absence of taxa detected with the Phylochip in a sediment core collected in the Ulleng Basin in 2011 (NCEI Accession 0278146)
This dataset contains biological and survey - biological data collected during deployment Ulleung_Basin_Core in the Japan Sea from 2011-01-01 to 2011-12-31. These data include family, order, and phylum. The instruments used to collect these data include Piston Corer. These data were collected by Brandon Briggs and Frederick Colwell of Oregon State University as part of the "The Effect of Methane on Microbial Community Distributions in the Ulleung Basin (Methane_Microbes)" project and "Center for Dark Energy Biosphere Investigations (C-DEBI)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2021-05-20.
The following is the text of the dataset description provided by BCO-DMO:
Dataset Description:
Presence/ absence of taxa detected with the Phylochip.
The following is the text of the dataset description provided by BCO-DMO:
Dataset Description:
Presence/ absence of taxa detected with the Phylochip.
Dataset Citation
- Cite as: Briggs, Brandon; Colwell, Frederick (2023). Presence/absence of taxa detected with the Phylochip in a sediment core collected in the Ulleng Basin in 2011 (NCEI Accession 0278146). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278146. Accessed [date].
Dataset Identifiers
ISO 19115-2 Metadata
gov.noaa.nodc:0278146
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Ordering Instructions | Contact NCEI for other distribution options and instructions. |
Distributor |
NOAA National Centers for Environmental Information +1-301-713-3277 NCEI.Info@noaa.gov |
Dataset Point of Contact |
NOAA National Centers for Environmental Information ncei.info@noaa.gov |
Time Period | 2011-01-01 to 2011-12-31 |
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West: 131
East: 131
South: 37
North: 37
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Dataset Progress Status | Complete - production of the data has been completed Historical archive - data has been stored in an offline storage facility |
Data Update Frequency | As needed |
Supplemental Information | Acquisition Description: In summary, sediment cores were collected using a Furor Hydraulic Piston Corer following the Integrated Ocean Drilling Program (IODP) guidelines for obtaining high quality microbiology cores. Aboard ship, whole round cores were subcored by paring the outer two cm of sediment with an alcohol and flame sterilized chisel. The sub-cores were placed into sterile Whirl Pak Bags and stored at -80C. DNA was extracted from 10g of sediment using a PowerMax Soil DNA extraction kit. DNA was amplified using 27F and 1492R (bacterial) or 4F and 1492R (archaeal) universal primers. 150ng of bacterial and 50ng of archaeal amplicons were hybridized to the PhyloChip array. |
Purpose | This dataset is available to the public for a wide variety of uses including scientific research and analysis. |
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Last Modified: 2024-05-31T18:50:46Z
For questions about the information on this page, please email: ncei.info@noaa.gov
For questions about the information on this page, please email: ncei.info@noaa.gov