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CO2 × temperature specific early life survival and growth of Menidia menidia assessed by 5 factorial experiments from 2014-05-05 to 2017-06-01 (NCEI Accession 0278073)

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This dataset contains biological, chemical, physical, and survey - biological data collected at lab Avery_Point during deployments Mumford_Cove and Poquot_Beach in the North Atlantic Ocean from 2014-05-05 to 2017-06-01. These data include growth, pCO2, pH, species, and water temperature. The instruments used to collect these data include Airstone, Aquarium chiller, Automatic titrator, Dissolved Oxygen Sensor, Immersion heater, Refractometer, Seine Net, and pH Sensor. These data were collected by Janet Nye of Stony Brook University - SoMAS and Christopher S. Murray and Hannes Baumann of University of Connecticut as part of the "Collaborative research: Understanding the effects of acidification and hypoxia within and across generations in a coastal marine fish (HYPOA)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2018-07-24.

The following is the text of the dataset description provided by BCO-DMO:

CO2 x temperature specific early life survival and growth assessed by 5 factorial experiments

Dataset Description:
CO2 x temperature specific early life survival and growth assessed by 5 factorial experiments.

These data are published in:Murray, C.S. & Baumann, H. 2018 You better repeat it: complex temperature × CO2 effects in Atlantic silverside offspring revealed by serial experimentation. Diversity 10, 1-19. https://doi.org/10.3390/d10030069
  • Cite as: Baumann, Hannes; Murray, Christopher S.; Nye, Janet (2023). CO2 × temperature specific early life survival and growth of Menidia menidia assessed by 5 factorial experiments from 2014-05-05 to 2017-06-01 (NCEI Accession 0278073). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278073. Accessed [date].
gov.noaa.nodc:0278073
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2014-05-05 to 2017-06-01
Spatial Bounding Box Coordinates
West: -73.103
East: -72.015
South: 40.947
North: 41.322
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • Murray, Christopher and Baumann, Hannes (2018) CO2 × temperature specific early life survival and growth of Menidia menidia assessed by 5 factorial experiments. Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2018-04-05. https://doi.org/10.1575/1912/bco-dmo.742200
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2023-05-12
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
CO2 × temperature manipulations and measurements:
For 2 × 2 and 3 × 2 factorial designs, replicate rearing containers (20 L) were placed into large temperature-controlled water baths. Elevated CO 2 levels were achieved via gas proportioners (ColeParmer®) mixing air with 100% CO 2 (bone dry grade) that was delivered continuously to the bottom of each replicate rearing container via airstone. To counteract metabolic CO 2 accumulation, control CO 2 conditions were achieved by forcing compressed laboratory air through a series of CO 2 stripping units containing granular soda lime (AirGas ® ), a particle filter (1 µm), and then to each replicate via airstone. Target pH levels were monitored daily using a handheld pH probes (Orion Ross Ultra pH/ATC Triode with Orion Star A121 pH Portable Meter; Intellical PHC281 pH Electrode with Hach® HQ11D Handheld pH/ORP Meter) calibrated bi-weekly with 2-point pH NBS references. Continuous bubbling maintained dissolved oxygen saturation (>8 mg/ DO) in rearing vessels. Target treatment temperatures were controlled by thermostats (Aqualogic ® ) which powered chillers (DeltaStar®) or glass submersible heaters to maintain water bath temperatures. For 3 × 3 factorial experiments, we developed an automated acidification system composed of nine discrete recirculation units designed for larval fish rearing. We designed a LabView (National Instruments ® ) based program to fully automate the control of seawater chemistry. The software interfaces with the recirculating units via a data-acquisition module (NI cDAQ-9184, National Instruments ® ), which controls nine sampling pumps (one per tank) and a series of gas and water solenoid valves, while receiving input from a central pH electrode (Hach pHD ® digital electrode calibrated weekly using 2-point pH NBS references) and dissolved oxygen probe (Hach LDO ® Model 2). The software sequentially assesses the pH conditions in each rearing unit (each tank once per hour) by pumping water for ~450 seconds through the housing of the central pH probe, comparing measured pH levels to set-points and then adjusting levels by bubbling standardized amounts 100% CO 2 (bone dry grade, AirGas ® ) or CO 2 -stripped air into the sump of each tank. The software also maintains DO saturation (>8 mg/l) by bubbling in CO 2 -stripped air. LabView logs current pH, temperature, and DO conditions before cycling to the next unit. Temperatures were controlled by thermostats (Aqualogic ® ) that powered submersible heaters or in-line chillers (DeltaStar ® ).

Actual treatment CO 2 levels were determined based on measurements of pH, temperature, salinity, and total alkalinity ( A T ). Treatment tanks were sampled three times per experiment for measurements of A T (μmol kg -1 ). Seawater was siphoned and filtered (to 10 µm) into 300 ml borosilicate bottles. Salinity was measured at the time of sampling using a refractometer. Bottles were stored at 3˚C and measured for A T within two weeks of sampling using an endpoint titration (Mettler Toledo ® G20 Potentiometric Titrator). Methodological accuracy (within ±1%) of alkalinity titrations were verified and calibrated using Dr. Andrew Dickson’s (University of California San Diego, Scripps Institution of Oceanography) certified reference material for A T in seawater. The partial pressure of CO 2 (pCO 2, ; μatm) was calculated in CO2SYS (V2.1, ) based on measured A T , pH NBS , temperature, and salinity using K1 and K2 constants from Mehrbach et al. (1973) refit by Dickson and Millero (1987) and Dickson (1990) for KHSO 4 .

Field sampling and experimental designs:
Collections of wild, spawning ripe Atlantic silversides were made during high tide 1-3 days prior to full or new moons during the species spawning season. Adults were caught with a 30 m × 2 m beach seine from local salt marshes and transported live to our laboratory facilities. Ripe adults were held overnight at 20°C in well aerated tanks at low densities with no food and strip spawned the next day.

For each experiment, eggs from 20+ running-ripe females were gently mixed into shallow plastic dishes lined with 1 mm plastic window screening. 20+ males were stripped-spawned together into 500 ml glass beakers, mixed with seawater, stirred, then gently poured into spawning dishes and mixed with eggs for ~15 minutes. Screens were rinsed with seawater to remove unfertilized eggs and then soaked in a 100 ppm buffered iodine (Ovadine ® ) solution for 15 minutes to prevent fungal infection. Experiments were initiated within two hours of fertilization when replicate rearing vessels received precisely 100 embryos. Vessels were filled with clean seawater (filtered to 1 µm and UV sterilized). Optimal salinity (27-31) and light conditions (15 h light:9 h dark) for rearing M. menidia were maintained across experiments. Upon hatching larvae were immediately provided ad libitum rations of newly hatched brine shrimp nauplii ( Artemia salina, San Francisco strain, brineshrimpdirect.com) and equal rations of powdered weaning diet (Otohime Marine Fish Diet, size A1, Reed Mariculture®). To quantify hatching survival, one day post first hatch larvae were counted by gently scooping small groups into replacement rearing vessels. For initial hatch measurements, random sub-samples (N = 10) from each replicate were preserved in 5% formaldehyde/freshwater solution buffered with saturated sodium tetraborate. All experiments were terminated when larvae reached ~10 mm standard length (SL). At termination, all survivors were counted and measured for standard length (SL, nearest 0.01 mm) via calibrated digital images (Image Pro Premier ® V9.0).
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Baumann, Hannes; Murray, Christopher S.; Nye, Janet (2023). CO2 × temperature specific early life survival and growth of Menidia menidia assessed by 5 factorial experiments from 2014-05-05 to 2017-06-01 (NCEI Accession 0278073). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278073. Accessed [date].
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters BODC Parameter Usage Vocabulary Global Change Master Directory (GCMD) Science Keywords MEDATLAS Parameter Usage Vocabulary Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Place keywords NODC SEA AREA NAMES THESAURUS Global Change Master Directory (GCMD) Location Keywords Provider Place Names
Project keywords BCO-DMO Standard Projects Provider Deployment IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Baumann, Hannes; Murray, Christopher S.; Nye, Janet (2023). CO2 × temperature specific early life survival and growth of Menidia menidia assessed by 5 factorial experiments from 2014-05-05 to 2017-06-01 (NCEI Accession 0278073). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278073. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2023-05-12T04:07:30Z - NCEI Accession 0278073 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • net
  • oxygen sensor
  • pH sensor
  • refractometer
  • titrator
Last Modified: 2024-05-31T15:15:28Z
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