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Dataset Overview | National Centers for Environmental Information (NCEI)

Eukaryotic phytoplankton flow cytometric results from salp grazing incubations conducted on R/V Tangaroa cruise TAN1810 during Oct-Nov 2018 (NCEI Accession 0278015)

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This dataset contains biological and survey - biological data collected on R/V Tangaroa during cruise TAN1810 from 2018-10-23 to 2018-11-21. These data include stage. The instruments used to collect these data include Flow Cytometer, Niskin bottle, and Plankton Net. These data were collected by Michael Stukel of Florida State University, Moira Decima of University of California-San Diego, and Karen E. Selph of University of Hawaii at Manoa as part of the "Collaborative Research: Quantifying trophic roles and food web ecology of salp blooms of the Chatham Rise (Salp Food Web Ecology)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2022-09-13.

The following is the text of the dataset description provided by BCO-DMO:

Eukaryotic Phytoplankton Flow Cytometry from Salp Incubations
  • Cite as: Stukel, Michael; Decima, Moira; Selph, Karen E. (2023). Eukaryotic phytoplankton flow cytometric results from salp grazing incubations conducted on R/V Tangaroa cruise TAN1810 during Oct-Nov 2018 (NCEI Accession 0278015). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278015. Accessed [date].
gov.noaa.nodc:0278015
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Distribution Formats
  • MAT-file
  • TSV
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
NCEI.Info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2018-10-23 to 2018-11-21
Spatial Bounding Box Coordinates
West: 174.095
East: 179.9428
South: -45.5503
North: -42.742
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • Stukel, M., Selph, K. E., Decima, M. (2021) Eukaryotic phytoplankton flow cytometric results from salp grazing incubations conducted on R/V Tangaroa cruise TAN1810 during Oct-Nov 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2021-04-08. https://doi.org/10.26008/1912/bco-dmo.846664.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2023-05-11
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
This dataset seeks to quantify food web flows through contrasting salp-dominated and salp-absent water parcels near the Chatham Rise off western New Zealand where salp blooms are a predictable phenomenon.

Paired 20-liter plankton kreisels or 30-liter pseudo-kreisels were gently filled (using silicon tubing) with mixed layer seawater collected by CTD-Niskin rosette casts at ~22:00 local time. Salps for incubations were collected at ~23:00 local time using the salp net. The net was towed slowly and briefly (5-10 minutes) through the mixed layer. Healthy specimens, i.e., those that showed no physical damage, were then gently transferred (using a large ladle) into a bucket containing filtered surface seawater Specimens were further observed (15-30 minutes) to ensure they actively swam (i.e., that they appeared healthy). They were then transferred into one of the paired kreisels (+Salp treatment), while the second kreisel was used as a control treatment with prey only. We successfully collected and incubated S. thompsoni blastozooids and oozooids ranging in size from 50 – 128 millimeters. We also conducted three incubations with a chain of blastozooids (6-8 millimeter individuals) released by an oozooid inside of one of the plankton kreisels. We found that this was the only way to successfully obtain such small blastozooids in healthy conditions. We also incubated a 112-millimeter Thetys vagina oozooid.

Water was circulated within the kreisels using a peristaltic pump and silicon tubing. Just after salp transfer to the kreisels, initial samples for flow cytometry were taken from each experimental and control kreisel. Additional time points were taken approximately every 2 hours and analyzed in near real time to allow us to monitor salp grazing. Incubations typically lasted ~24 hours.

Samples from the salp incubations were analyzed at sea on a Becton-Dickinson Accuri C6 Plus flow cytometer to estimate the abundance and size of eukaryotic phytoplankton. Samples (~660 µL) were run live within ~1-2 h of collection, discriminating on the Chl a fluorescence signal. We estimated cell diameter from forward light scatter after developing a relationship based on analyses of multiple polystyrene bead sizes (0.99-10 µm diameter). We note that forward scatter is an imperfect proxy for equivalent spherical diameter, and thus the absolute cell sizes determined in our study should be assumed to have associated uncertainty.

For additional details on all methods, see Stukel et al. (in review).

Note: This dataset is also provided in .mat (MATLAB) format under Supplemental Files.
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords NODC PLATFORM NAMES THESAURUS BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords ICES/SeaDataNet Ship Codes
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Place keywords Provider Place Names
Project keywords BCO-DMO Standard Projects Provider Cruise IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Stukel, Michael; Decima, Moira; Selph, Karen E. (2023). Eukaryotic phytoplankton flow cytometric results from salp grazing incubations conducted on R/V Tangaroa cruise TAN1810 during Oct-Nov 2018 (NCEI Accession 0278015). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0278015. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees
  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2023-05-11T04:09:32Z - NCEI Accession 0278015 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • bottle
  • Flow Cytometer
  • net - plankton net
Platform
  • R/V TANGAROA
Last Modified: 2024-05-31T15:15:28Z
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