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Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project) from 2015-07-15 to 2015-09-10 (NCEI Accession 0277899)

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This dataset contains biological, physical, and survey - biological data collected at lab Strom during deployment Strom_2014 at Salish Sea: 48.5, -122.75 from 2015-07-15 to 2015-09-10. These data include PAR, chlorophyll a, and species. The instruments used to collect these data include Automated Cell Counter and Gas Chromatograph. These data were collected by Dr Suzanne Strom of Western Washington University - Shannon Point Marine Center as part of the "Environmental stress and signaling based on reactive oxygen species among planktonic protists (Protist signaling)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2019-03-18.

The following is the text of the dataset description provided by BCO-DMO:

Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments.

Dataset Description:
Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments.
  • Cite as: Strom, Suzanne (2023). Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project) from 2015-07-15 to 2015-09-10 (NCEI Accession 0277899). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0277899. Accessed [date].
gov.noaa.nodc:0277899
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  • TSV
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Distributor NOAA National Centers for Environmental Information
+1-301-713-3277
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Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Coverage Description Salish Sea: 48.5, -122.75
Time Period 2015-07-15 to 2015-09-10
Spatial Bounding Box Coordinates
West:
East:
South:
North:
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
    • NCEI Collection
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  • Strom, S. (2018) Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2018-01-11. https://doi.org/10.1575/1912/bco-dmo.723277.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2023-05-05
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
Acquisition Description:
Dinoflagellate culturing: Alexandrium fundyense (strain CCMP 1911) was obtained from the National Center for Marine Algae and Microbiota (NCMA). The strain was originally isolated from Sequim Bay, Washington, USA. Heterocapsa rotundata (strain K-0483), obtained from the Scandanavian Culture Collection of Algae and Protozoa, was isolated from the southern Kattegat Sea near Denmark. Dinoflagellate cultures were maintained in f/2 medium without added silicate at 15°C under a 12L:12D light cycle and transferred every two to three weeks into new media. Growth irradiance for A. fundyense was 53 µmol photons m -2 s -1 ; growth irradiance for H. rotundata was 12 µmol photons m -2 s -1 .

Cell concentration and cell volume: Cell concentration (cells mL -1 ) and cell volume (µm 3 cell -1 ) estimates for H. rotundata were obtained from live samples measured with a Beckman Coulter Z2 Particle Count and Size Analyzer with Z2 AccuComp software. For A. fundyense , samples were preserved in acid Lugol’s solution (final concentration 2%). Cells were counted in a 1 ml Sedgewick Rafter chamber using light microscopy; cell volume was estimated from length and width of cells (n = 42 or 83 cells per sample) measured with Leica Application Suite X image analysis software and assuming cell shape was approximated by an oblate ellipsoid.

Chlorophyll-a: Chl-a concentrations were measured by filtering samples through 0.7 µm effective pore size 25 mm glass fiber filters. Pigments were then extracted in 90% acetone for 24 h (dark, -20°C) and fluorescence was measured on a Turner 10-AU fluorometer using the acidification method. Concentrations are reported per cell and per unit cell volume.

Dissolved and particulate dimethylsulfoniopropionate (DMSP): DMSP samples (4 ml) were gravity-filtered through precombusted 0.7 µm effective pore size 25 mm glass fiber filters so as not to rupture the cells. For measurement of particulate (intracellular) DMSP (DMSPp), filters were placed into sealed 20-ml glass vials containing 3 ml of 5 N NaOH. For measurement of DMSP in the dissolved (extracellular) phase (DMSPd), the first 4.5 mL of each sample’s filtrate were caught in a 5 ml polystyrene culture tube, which was capped and stored at -80°C. Later, DMSPd samples were thawed and sparged with N 2 gas for 1 min to remove any dimethyl sulfide (DMS) already present. Each sparged sample (4 ml) was then dispensed into a 20-ml vial containing 1 ml of 5 N NaOH, and sealed. Upon being sealed, prepared vials for either analysis were allowed to equilibrate for at least 24 h, allowing for the 1:1 conversion of DMSP to gaseous DMS, detectable via gas chromatography. Standards for DMSPp were prepared from pre-diluted DMSP solutions at the same time that samples were filtered and sealed into vials, while DMSPd standards were made at the same time that samples were sparged and sealed into vials. Samples and standards were analyzed using a Shimadzu Gas Chromatograph 14-A equipped with a flame photometric detector and a Supelco packed Chromosil 330 column. The chromatograph was operated isothermally at 90°C with flow rates of hydrogen, air, and helium (carrier gas) at 50, 60, and 150 kPa, respectively. DMSPp samples and standards were measured via direct injection while DMSPd samples and standards were measured with a headspace sweep (He flow rate 40 kPa). DMSPp concentrations are reported per cell and per unit cell volume. DMSPd concentrations are reported per cell and per unit seawater volume.
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Strom, Suzanne (2023). Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project) from 2015-07-15 to 2015-09-10 (NCEI Accession 0277899). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0277899. Accessed [date].
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Project keywords BCO-DMO Standard Projects Provider Deployment IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Strom, Suzanne (2023). Size and chemical responses of two dinoflagellate species used in natural high light exposure experiments (Protist Signaling project) from 2015-07-15 to 2015-09-10 (NCEI Accession 0277899). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0277899. Accessed [date].
Data License
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2023-05-05T04:29:38Z - NCEI Accession 0277899 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • chromatograph
Last Modified: 2024-05-31T15:15:28Z
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