Differential proteomic analysis of the massive star coral Orbicella faveolata exposed to experimentally elevated temperatures (NCEI Accession 0242879)
An inshore-to-offshore gradient in reef coral resilience to high temperatures exists in the Upper Florida Keys, with massive corals of the highly turbid nearshore reefs demonstrating higher capacity to resist summer bleaching than offshore conspecifics. After corroborating this trend with diverse Orbicella faveolata genotypes exposed to elevated temperatures in the laboratory, a proteomic analysis was taken with a subset of 20 samples via iTRAQ labeling followed by nano-liquid chromatography+mass spectrometry; 46 host coral and 40 Symbiodiniaceae dinoflagellate proteins passed all stringent quality control criteria, and the partial proteomes of biopsies of 1) healthy controls, 2) sub-lethally-stressed samples, and 3) actively bleaching corals differed significantly from one another. The proteomic data were then used to train predictive models of coral colony bleaching susceptibility, and both generalized multivariate regression and neural network models were capable of doing so with 100% accuracy. Successful future testing of the predictive power of these models in situ will establish the capacity to monitor coral health on a proactive, pre-death timescale.
Dataset Citation
- Cite as: Mayfield, Anderson B. (2021). Differential proteomic analysis of the massive star coral Orbicella faveolata exposed to experimentally elevated temperatures (NCEI Accession 0242879). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0242879. Accessed [date].
Dataset Identifiers
ISO 19115-2 Metadata
gov.noaa.nodc:0242879
Download Data |
|
Distribution Formats |
|
Ordering Instructions | Contact NCEI for other distribution options and instructions. |
Distributor |
NOAA National Centers for Environmental Information +1-301-713-3277 ncei.info@noaa.gov |
Dataset Point of Contact |
NOAA National Centers for Environmental Information ncei.info@noaa.gov |
Time Period | 2017-06-25 to 2017-12-14 |
Spatial Bounding Box Coordinates |
West: -80.61573
East: -80.50205
South: 24.89742
North: 24.95375
|
Spatial Coverage Map |
General Documentation |
|
Associated Resources |
|
Publication Dates |
|
Data Presentation Form | Digital table - digital representation of facts or figures systematically displayed, especially in columns |
Dataset Progress Status | Complete - production of the data has been completed Historical archive - data has been stored in an offline storage facility |
Data Update Frequency | As needed |
Purpose | These proteomic (i.e., protein concentration) data were collected in order to better understand the molecular basis of resilience to rising seawater temperatures in replicate genotypes of the framework-building Caribbean coral Orbicella faveolata collected from several reef sites within the upper Florida Keys (see appended documents for permitting information, coordinates, and other supporting meta-data). |
Use Limitations |
|
Dataset Citation |
|
Cited Authors | |
Principal Investigators | |
Contributors | |
Resource Providers | |
Publishers | |
Acknowledgments |
|
Theme keywords |
NODC DATA TYPES THESAURUS
NODC OBSERVATION TYPES THESAURUS
WMO_CategoryCode
|
Data Center keywords | NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords |
Platform keywords |
Provider Platform Names
|
Instrument keywords |
NODC INSTRUMENT TYPES THESAURUS
Global Change Master Directory (GCMD) Instrument Keywords
Provider Instruments
|
Place keywords |
NODC SEA AREA NAMES THESAURUS
CoRIS Place Thesaurus
|
Project keywords |
NODC PROJECT NAMES THESAURUS
Provider Project Names
|
Keywords | NCEI ACCESSION NUMBER |
Keywords |
Send2NCEI Submission Package ID
|
Use Constraints |
|
Access Constraints |
|
Fees |
|
Lineage information for: dataset | |
---|---|
Processing Steps |
|
Output Datasets |
|
Lineage information for: dataset | |
---|---|
Processing Steps |
|
Acquisition Information (collection) | |
---|---|
Instrument |
|
Last Modified: 2024-09-17T19:17:22Z
For questions about the information on this page, please email: ncei.info@noaa.gov
For questions about the information on this page, please email: ncei.info@noaa.gov