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Size-fractionated major, minor, & trace particle composition and concentration from Leg 1 (Seattle, WA to Hilo, HI) of the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15, RR1814) on R/V Roger Revelle from Sept to Oct 2018 (NCEI Accession 0292193)

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This dataset contains chemical and physical data collected on R/V Roger Revelle during cruise RR1814 in the Gulf of Alaska and North Pacific Ocean from 2018-09-24 to 2018-10-21. These data include depth and trace element concentration. The instruments used to collect these data include CO2 Coulometer, Elemental Analyzer, Inductively Coupled Plasma Mass Spectrometer, Isotope-ratio Mass Spectrometer, Lachat QuikChem 8500 flow injection analysis system, and McLane Large Volume Pumping System WTS-LV. These data were collected by Jong-Mi Lee and Phoebe J. Lam of University of California-Santa Cruz as part of the "US GEOTRACES PMT: the geochemistry of size-fractionated suspended particles collected by in-situ filtration (PMT Size-fractionated Suspended Particles)" and "US GEOTRACES Pacific Meridional Transect (GP15) (U.S. GEOTRACES PMT)" projects and "U.S. GEOTRACES (U.S. GEOTRACES)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2024-02-05.

The following is the text of the dataset description provided by BCO-DMO:

GP15 size-fractionated major, minor, & trace particle composition and concentration - Leg 1

Dataset Description:
Methods and Sampling:
Sampling:

Size-fractionated particles were collected using dual-flow McLane Research in-situ pumps (WTS-LV) and 142-millimeter (mm) "mini-MULVFS" filter holders (Bishop et al., 2012; Lam et al., 2018; Lam et al., 2015a; Xiang and Lam, 2020). At most of the stations, two casts of 8 pumps each and two filter holders per pump were deployed to collect samples at 16 depths throughout the water column. At super stations, a 24-depth profile was obtained with three casts. The targeted depths of the wire-out were corrected using pressure readings from a self-recording Seabird 19plus CTD at the end of the line. One filter holder/flowpath was loaded with a Sefar polyester mesh prefilter (51 micrometers (μm) pore size, called the "Qp" filter) and paired Whatman QMA quartz fiber filters (1 μm pore size) in series ("QMA-side"). The other filter holder/flowpath was also loaded with a 51 μm prefilter (called the "Sp" filter), but it was followed by paired 0.8 μm Pall Supor800 polyethersulfone filters ("Supor-side"). A 150 μm Sefar polyester mesh was placed underneath all 51 μm prefilters and QMA filters as a support to facilitate filter handling but not analyzed. All filters and filter holders were acid-leached before use based on the recommended methods in the GEOTRACES sample and sample-handling protocols Cutter et al., 2010). QMA filters were pre-combusted at 450 degrees Celsius (°C) for 4 hours after acid leaching.

A special plate was manufactured for one of the pumps that could hold two additional mini-MULVFS filter holders that were loaded with full filter sets but not connected to plumbing. These 'dipped blank' filters included the full filter sets (51 µm prefilter on top of paired QMA or paired Supor filters) with a 0.2um Supor polyethersulfone filter on top of the 51 µm polyester prefilters to exclude all particles from the main filter set. These were processed identically to the regular filters and functioned as full process blanks A total of 49 dipped blank filters were used for blank subtraction, calculations of uncertainties, and determination of detection limits (Table 2).

In this dataset, data reported from the 51 μm prefilter are referred to with an "LPT" suffix to indicate large particulate total concentrations (>51 μm). Samples could come from the QMA side ("Qp" filter) or the Supor side ("Sp" filter) and are treated equivalently. Data reported from the main filters (QMA—1-51 μm —or Supor—0.8-51 μm) are from the top filter of the pair only, and are referred to with an "SPT" suffix to indicate the small particulate total concentrations.

Analytical Procedures:

Particulate organic carbon (POC) and particulate nitrogen (PN):
For SPT particles, a 25 mm punch of QMA filter was dried at 55°C at sea. LPT (>51 µm) particles were rinsed at sea from the Sp filter using 0.2 µm-filtered seawater onto a 25mm 0.8µm Ag filter (Sterlitech) and dried at 55°C at sea. These samples were beta counted for ²³⁴Th at sea by the CafeTh lab at WHOI, then sent to the Lam lab at UCSC for POC and PN analyses. POC and PN sample processing was similar to what was described in Xiang and Lam (2020). Filter samples were dismounted from the beta mounts. Typically, a 22 mm QMA subpunch or the entire 25 mm 0.8 µm Ag filter were fumed in a desiccator with concentrated HCl and dried in the oven at 60 °C overnight, and then pelletized with 30mm tin discs from EA Consumables. Tin disc encapsulated samples were measured using a CE Instruments NC 2500 model Carbon/Nitrogen Analyzer interfaced to a ThermoFinnigan Delta Plus XP isotope ratio mass spectrometer (IRMS) at the Stable Isotope Laboratory at University of California, Santa Cruz. Isotopic results obtained from the IRMS were calibrated using reference materials Acetanilide (C8H9NO). The effect of dissolved organic carbon sorption is corrected with isotopic values of dipped blanks. The isotopic data are expressed in the standard delta notation as per mil deviations (‰) with respect to international standards of Pee Dee Belemnite (PDB) and atmospheric nitrogen. The precision of the internal standard (Pugel) analyzed along with the samples in the run is 0.07‰ for d13C and 0.14‰ for d15N.

Particulate inorganic carbon (PIC):
A UIC Carbon dioxide coulometer was used for PIC measurement. Briefly, PIC on SPT QMA punches or 1/16 LPT QMA-side prefilter was converted to CO₂ by addition of 2 N sulfuric acid. CO₂ produced is carried by a gas stream into a coulometer cell where CO₂ is quantitatively absorbed by a cathode solution, reacted to form a titratable acid and measured based on the change in current.

Biogenic silica (bSi):
A 1-hour alkaline leach with 0.2 M NaOH at 85°C was used to leach bSi for both size fractions prior to the measurement on a Lachat QuikChem 8000 Flow Injection Analyzer at UCSC. A 4-hour time-series leaching approach to correct for the contribution from lithogenic Si was applied to a subset of stations and the deepest 3-4 bare bottom samples from all stations (cf., Barão et al., 2015; DeMaster, 1981; Lam et al., 2018). Lithogenic Si was only important for some near-bottom samples, so the intercept ("t0" value) was used for the near-bottom samples; the 1-hour timepoint was used for all other samples.

Particulate trace metals (pTM):
pTM total concentrations (SPT, LPT): The digestion method of pTM is based on a refluxing method (Cullen and Sherrell, 1999; Planquette and Sherrell, 2012) with light modifications similar to the "Piranha method" in Ohnemus et al. (2014). In brief, the Supor filter was adhered to the wall by surface tension in a 15-milliliter (mL) flat-bottom screw-cap Savillex vial to avoid immersion. After 4-hours of refluxing at 110 °C with an ultrapure (ARISTAR® or Optima grade) 50% HNO3/10% HF (v/v) mixture, digestion acids were transferred into secondary vials and heated to near dryness. The residue was heated in 50% HNO3/15% H2O2 (v/v) to dryness at 110 °C. The final residue was re-dissolved with 2 mL 5% HNO3 spiked with 1 ppb In. Two certified reference materials (BCR-414 and PACS-2) were digested routinely alongside the samples to assure the quality of each digestion.

pTM leachable concentrations (SPL): A 1/16ᵗʰ slice of Supor filter was leached using the "Berger Leach", a weak acid leach comprising 25% Q-grade acetic acid and 0.02M reagent grade hydroxylamine hydrochloride (Berger et al. 2008). Samples are submerged in the Berger Leach solution and heated in a 95°C water bath for 10 minutes, cooled at room temperature for about 1.3 hours, and then centrifuged for 30 minutes at 4100 rpm. Total leach time should be 2 hours. The supernatant is transferred to a 15 mL Savillex vial and dried for over an hour at 110°C. The residue is redissolved and dried in concentrated HNO3 twice and brought up in 5% HNO2 spiked with 1 ppb In. Two certified reference materials (BCR-414 and PACS-2) were leached routinely alongside the samples to assure the quality of each leach.

Analysis by ICP-MS: Sample solutions were analyzed using an Element XR high-resolution ICP-MS (Thermo Scientific) at the UCSC Plasma Analytical Facility. Elemental concentrations were standardized using multi-element, external standard curves prepared from NIST atomic absorption-standards in 5% HNO₃. Instrument drift and matrix effects were corrected using the internal 1ppb In standard and monitored using a mixed element run standard. Concentrations were determined using external standard curves of mixed trace elements standards. If a parameter was measured on the ICP-MS, the isotope and resolution (LR=Low Resolution; MR=Medium Resolution) used for the concentration measurement are indicated in Table 4.

Further details on instrumentation can be found in Table 3.
  • Cite as: Lam, Phoebe J.; Lee, Jong-Mi (2024). Size-fractionated major, minor, & trace particle composition and concentration from Leg 1 (Seattle, WA to Hilo, HI) of the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15, RR1814) on R/V Roger Revelle from Sept to Oct 2018 (NCEI Accession 0292193). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0292193. Accessed [date].
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Distributor NOAA National Centers for Environmental Information
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Dataset Point of Contact NOAA National Centers for Environmental Information
ncei.info@noaa.gov
Time Period 2018-09-24 to 2018-10-21
Spatial Bounding Box Coordinates
West: -156.962
East: -152
South: 19.681
North: 56.058
Spatial Coverage Map
General Documentation
Associated Resources
  • Biological, chemical, physical, biogeochemical, ecological, environmental and other data collected from around the world during historical and contemporary periods of biological and chemical oceanographic exploration and research managed and submitted by the Biological and Chemical Oceanography Data Management Office (BCO-DMO)
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  • Lam, P. J., Lee, J., Amaral, V. J., Laubach, A., Carracino, N., Rojas, S., Mateos, K. (2024) Size-fractionated major, minor, & trace particle composition and concentration from Leg 1 (Seattle, WA to Hilo, HI) of the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15, RR1814) on R/V Roger Revelle from Sept to Oct 2018. Biological and Chemical Oceanography Data Management Office (BCO-DMO). (Version 1) Version Date 2024-01-30. https://doi.org/10.26008/1912/bco-dmo.918811.1
  • Parent ID (indicates this dataset is related to other data):
    • gov.noaa.nodc:BCO-DMO
Publication Dates
  • publication: 2024-05-02
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Purpose This dataset is available to the public for a wide variety of uses including scientific research and analysis.
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  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Lam, Phoebe J.; Lee, Jong-Mi (2024). Size-fractionated major, minor, & trace particle composition and concentration from Leg 1 (Seattle, WA to Hilo, HI) of the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15, RR1814) on R/V Roger Revelle from Sept to Oct 2018 (NCEI Accession 0292193). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0292193. Accessed [date].
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Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
BCO-DMO Standard Parameters Global Change Master Directory (GCMD) Science Keywords Originator Parameter Names
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS Global Change Master Directory (GCMD) Data Center Keywords
Platform keywords NODC PLATFORM NAMES THESAURUS BCO-DMO Platform Names Global Change Master Directory (GCMD) Platform Keywords ICES/SeaDataNet Ship Codes
Instrument keywords NODC INSTRUMENT TYPES THESAURUS BCO-DMO Standard Instruments Global Change Master Directory (GCMD) Instrument Keywords Originator Instrument Names
Place keywords NODC SEA AREA NAMES THESAURUS Global Change Master Directory (GCMD) Location Keywords Provider Place Names
Project keywords NODC PROJECT NAMES THESAURUS BCO-DMO Standard Programs BCO-DMO Standard Projects Global Change Master Directory (GCMD) Project Keywords Provider Cruise IDs Provider Funding Award Information
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Lam, Phoebe J.; Lee, Jong-Mi (2024). Size-fractionated major, minor, & trace particle composition and concentration from Leg 1 (Seattle, WA to Hilo, HI) of the US GEOTRACES Pacific Meridional Transect (PMT) cruise (GP15, RR1814) on R/V Roger Revelle from Sept to Oct 2018 (NCEI Accession 0292193). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0292193. Accessed [date].
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  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
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Processing Steps
  • 2024-05-02T15:59:24Z - NCEI Accession 0292193 v1.1 was published.
Output Datasets
Acquisition Information (collection)
Instrument
  • coulometer for DIC measurement
  • Flow-through pump
  • mass spectrometer
Platform
  • R/V Roger Revelle
Last Modified: 2024-05-31T15:15:28Z
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