Dataset Overview | National Centers for Environmental Information (NCEI)

Contaminant Data and Growth and Survival Measurements From Juvenile Chinook Salmon Dietary Exposure Study 2020-02-02 to 2021-04-19 (NCEI Accession 0290149)

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The data included in this package were conducted as part of a Natural Resource Damage Assessment (NRDA) addressing historical pollution at the designated Superfund site. The National Oceanic and Atmospheric Administration (NOAA) evaluated contaminant-related effects from dietary exposure to environmentally relevant concentrations and mixture profiles in juvenile Chinook salmon using two endpoints: growth assessment and disease susceptibility. The dose and chemical proportions were determined from the stomach contents of Laboratory-reared juvenile Chinook salmon recently collected from contaminated waterways. Groups of fish were fed a mixture with fixed proportions of polychlorinated biphenyls (PCBs), dichlorodiphenyltrichloroethanes (DDTs), and polycyclic aromatic hydrocarbons (PAHs) at five concentrations for 35 days.

Data is provided in three spreadsheets in 0-data/Data/ directory and include the length , weight, otoliths, and tissue chemistry of composite samples of lab-raised juvenile Chinook salmon. The corresponding data dictionary for the headers is located in 0-data/Documentation/DataDictionary/ and describes the specific chemical, biological, instruments, etc. codes. Metadata XML files describing the sampling processing procedures are provided in the 0-data/Metadata for each respective experiment. The file 0-data/Data/readme.txt describes the data package and contents of each directory in more detail.

Dataset Citation

Cite as: Lundin, Jessica; Chittaro, Paul M.; Schultz, Irvin R.; Arkoosh, Mary R.; Baker, Mary C.; Baldwin, David H.; Collier, Tracy K.; French, Barbara; Kern, John W.; Labenia, Jana S.; Linbo, Tiffany L.; Merten, Amy A.; Schuster, Cameron M.; Veggerby, Karl B.; Ylitalo, Gina M.; Scholz, Nathaniel; Dietrich, Joseph P. (2024). Contaminant Data and Growth and Survival Measurements From Juvenile Chinook Salmon Dietary Exposure Study 2020-02-02 to 2021-04-19 (NCEI Accession 0290149). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/ts4d-bz63. Accessed [date].

Dataset Identifiers

ISO 19115-2 Metadata

gov.noaa.nodc:0290149

Full Text · XML

Download Data	HTTPS (download) Navigate directly to the URL for data access and direct download. FTP (download) These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
Distribution Formats	CSV ODS PDF XML Text File
Ordering Instructions	Contact NCEI for other distribution options and instructions.
Distributor	NOAA National Centers for Environmental Information +1-301-713-3277 NCEI.Info@noaa.gov
Dataset Point of Contact	NOAA National Centers for Environmental Information ncei.info@noaa.gov

Time Period	2020-02-02 to 2021-04-19
Spatial Bounding Box Coordinates	West: -122.82659 East: -122.655615 South: 45.518177 North: 45.654225
Spatial Coverage Map

General Documentation

NCEI Dataset Landing Page
Navigate directly to the URL for a descriptive web page with download links.
Descriptive Information
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Associated Resources

Lundin, J. I., Chittaro, P. M., Schultz, I. R., Arkoosh, M. R., Baker, M. C., Baldwin, D. H., Collier, T. K., French, B. L., Kern, J. W., Labenia, J. S., Linbo, T. L., Merten, A. A., Schuster, C. M., Veggerby, K. B., Ylitalo, G. M., Scholz, N. L., & Dietrich, J. P. (2023). Dietary Exposure to Environmentally Relevant Levels of Chemical Contaminants Reduces Growth and Survival in Juvenile Chinook Salmon. Environmental Science & Technology, 58(1), 132–142. https://doi.org/10.1021/acs.est.3c06330
- https://doi.org/10.1021/acs.est.3c06330
  related journal article

Publication Dates	publication: 2024-03-21
Data Presentation Form	Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status	Complete - production of the data has been completed Historical archive - data has been stored in an offline storage facility
Data Update Frequency	As needed
Supplemental Information	Submission Package ID: 64W8B4
Purpose	These data support the Portland Harbor 2020 Juvenile Chinook Dietary Exposure study as part of the Natural Resource Damage Assessment (NRDA). Samples were collected of fish tissue and otoliths then analyzed for Polycyclic Aromatic Hydrocarbons (PAHs), Polychlorinated Biphenyls (PCBs), and Dichlorodiphenyltrichloroethane (DDT). Data have been standardized and integrated into the DIVER (Data Integration Visualization Exploration and Management) data warehouse for data query and download.
Use Limitations	accessLevel: Public Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.

Dataset Citation	Cite as: Lundin, Jessica; Chittaro, Paul M.; Schultz, Irvin R.; Arkoosh, Mary R.; Baker, Mary C.; Baldwin, David H.; Collier, Tracy K.; French, Barbara; Kern, John W.; Labenia, Jana S.; Linbo, Tiffany L.; Merten, Amy A.; Schuster, Cameron M.; Veggerby, Karl B.; Ylitalo, Gina M.; Scholz, Nathaniel; Dietrich, Joseph P. (2024). Contaminant Data and Growth and Survival Measurements From Juvenile Chinook Salmon Dietary Exposure Study 2020-02-02 to 2021-04-19 (NCEI Accession 0290149). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/ts4d-bz63. Accessed [date].
Cited Authors	Lundin, Jessica NOAA Northwest Fisheries Science Center Chittaro, Paul M. NOAA Northwest Fisheries Science Center Schultz, Irvin R. NOAA Northwest Fisheries Science Center Arkoosh, Mary R. NOAA Northwest Fisheries Science Center Baker, Mary C. NOAA Office of Response and Restoration Baldwin, David H. NMFS Office of Protected Resources Collier, Tracy K. Western Washington University French, Barbara NOAA Northwest Fisheries Science Center Kern, John W. Kern Statistical Services, Inc. Labenia, Jana S. NOAA Northwest Fisheries Science Center Linbo, Tiffany L. NOAA Northwest Fisheries Science Center Merten, Amy A. NOAA Office of Response and Restoration Schuster, Cameron M. NOAA Northwest Fisheries Science Center Veggerby, Karl B. NOAA Northwest Fisheries Science Center Ylitalo, Gina M. NOAA Northwest Fisheries Science Center Scholz, Nathaniel NOAA Northwest Fisheries Science Center Dietrich, Joseph P. NOAA Northwest Fisheries Science Center
Collaborators	Zachary Winters-Staszak US DOC; NOAA; NOS; Office of Response and Restoration (OR&R)
Contributors	US DOC; NOAA; NOS; Office of Response and Restoration (OR&R)
Resource Providers	Zachary Winters-Staszak US DOC; NOAA; NOS; Office of Response and Restoration (OR&R) US DOC; NOAA; NOS; Office of Response and Restoration (OR&R)
Publishers	NOAA National Centers for Environmental Information
Acknowledgments	Related Funding Agency: US DOC; NOAA; NOS; Office of Response and Restoration

Theme keywords	NODC DATA TYPES THESAURUS BIOCHEMISTRY BIOMASS growth rate OTOLITH Pesticides POLYCHLORINATED BIPHENYLS POLYNUCLEAR AROMATIC HYDROCARBONS (PAH) Semivolatile Organic Compounds SPECIES IDENTIFICATION TAXONOMIC CODE NODC OBSERVATION TYPES THESAURUS laboratory analyses WMO_CategoryCode oceanography Global Change Master Directory (GCMD) Science Keywords EARTH SCIENCE > AGRICULTURE > AGRICULTURAL CHEMICALS > PESTICIDES EARTH SCIENCE > AGRICULTURE > ANIMAL SCIENCE > ANIMAL PHYSIOLOGY AND BIOCHEMISTRY EARTH SCIENCE > BIOSPHERE > VEGETATION > BIOMASS EARTH SCIENCE > HUMAN DIMENSIONS > ENVIRONMENTAL GOVERNANCE/MANAGEMENT > ENVIRONMENTAL ASSESSMENTS EARTH SCIENCE > HUMAN DIMENSIONS > ENVIRONMENTAL IMPACTS EARTH SCIENCE > HUMAN DIMENSIONS > ENVIRONMENTAL IMPACTS > OIL SPILLS EARTH SCIENCE > OCEANS > AQUATIC SCIENCES EARTH SCIENCE > OCEANS > OCEAN CHEMISTRY Provider Keywords GCMD - OTHER KEYWORDS > DISCIPLINES > CHEMSITRY > ANALYTICAL CHEMISTRY Tissue Chemistry Water Quality
Data Center keywords	NODC COLLECTING INSTITUTION NAMES THESAURUS US DOC; NOAA; NOS; Office of Response and Restoration NODC SUBMITTING INSTITUTION NAMES THESAURUS US DOC; NOAA; NOS; Office of Response and Restoration Global Change Master Directory (GCMD) Data Center Keywords DOC/NOAA/NOS/ORR > Office of Response and Restoration, National Ocean Service, NOAA, U.S. Department of Commerce
Instrument keywords	NODC INSTRUMENT TYPES THESAURUS microscope Global Change Master Directory (GCMD) Instrument Keywords MICROSCOPES > MICROSCOPES Provider Instruments GCMS VA
Place keywords	NODC SEA AREA NAMES THESAURUS Columbia River estuary - Washington/Oregon Global Change Master Directory (GCMD) Location Keywords OCEAN > PACIFIC OCEAN > EASTERN PACIFIC OCEAN OCEAN > PACIFIC OCEAN > NORTH PACIFIC OCEAN Provider Place Names Portland Harbor, Willamette River, Portland, Oregon
Project keywords	NODC PROJECT NAMES THESAURUS Natural Resources Damage Assessment Process (NRDA Process)
Keywords	NCEI ACCESSION NUMBER 0290149

Use Constraints	Cite as: Lundin, Jessica; Chittaro, Paul M.; Schultz, Irvin R.; Arkoosh, Mary R.; Baker, Mary C.; Baldwin, David H.; Collier, Tracy K.; French, Barbara; Kern, John W.; Labenia, Jana S.; Linbo, Tiffany L.; Merten, Amy A.; Schuster, Cameron M.; Veggerby, Karl B.; Ylitalo, Gina M.; Scholz, Nathaniel; Dietrich, Joseph P. (2024). Contaminant Data and Growth and Survival Measurements From Juvenile Chinook Salmon Dietary Exposure Study 2020-02-02 to 2021-04-19 (NCEI Accession 0290149). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/ts4d-bz63. Accessed [date].
Access Constraints	Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees	In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.

Lineage information for: dataset
Processing Steps	2024-03-21T16:17:48Z - NCEI Accession 0290149 v1.1 was published.
Output Datasets	NCEI Accession 0290149 v1.1 NCEI Accession 0290149 v1.1 (download) published 2024-03-21T16:17:48Z

Lineage information for: dataset
Processing Steps	Parameter or Variable: Tissue Chemistry (measured); Units: VA; Observation Category: laboratory analysis; Sampling Instrument: GCMS; Sampling and Analyzing Method: Multiple methods defined in data. https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf; Data Quality Method: NOAA stage 4 data validation.. Parameter or Variable: OTOLITH (measured); Units: VA; Observation Category: laboratory analysis; Sampling Instrument: microscope; Sampling and Analyzing Method: https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf; Data Quality Method: https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf. Parameter or Variable: Water Quality (measured); Units: VA; Observation Category: laboratory analysis; Sampling Instrument: VA; Sampling and Analyzing Method: https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf; Data Quality Method: https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf.

Lineage information for: dataset

Processing Steps

Parameter or Variable: Tissue Chemistry (measured); Units: VA; Observation Category: laboratory analysis; Sampling Instrument: GCMS; Sampling and Analyzing Method: Multiple methods defined in data. https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf; Data Quality Method: NOAA stage 4 data validation..
Parameter or Variable: OTOLITH (measured); Units: VA; Observation Category: laboratory analysis; Sampling Instrument: microscope; Sampling and Analyzing Method: https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf; Data Quality Method: https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf.
Parameter or Variable: Water Quality (measured); Units: VA; Observation Category: laboratory analysis; Sampling Instrument: VA; Sampling and Analyzing Method: https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf; Data Quality Method: https://pub-data.diver.orr.noaa.gov/portland-harbor/20200309_PH_Chinook%20Lab_QAPP-WP%20FINAL_4720.pdf.

Acquisition Information (collection)
Instrument	microscope

Last Modified: 2024-06-10T13:33:00Z
For questions about the information on this page, please email: ncei.info@noaa.gov

Contaminant Data and Growth and Survival Measurements From Juvenile Chinook Salmon Dietary Exposure Study 2020-02-02 to 2021-04-19 (NCEI Accession 0290149)

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