Abiotic and biotic data from Zostera Experimental Network (ZEN) 2014 surveys (ZEN 2 project) (NCEI Accession 0278038)
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title: Abiotic and biotic data from Zostera Experimental Network (ZEN) 2014 surveys (ZEN 2 project) (NCEI Accession 0278038)
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abstract: This dataset contains biological, chemical, physical, and survey - biological data collected at eelgrass_beds_global during deployment ZEN2_2014 in the Adriatic Sea, Coastal Waters of Southeast Alaska and British Columbia, Gulf of Bothnia, Inland Sea (Seto Naikai), Inner Sea - West Coast Scotland, Irish Sea and St. George's Channel, Japan Sea, Mediterranean Sea, New York Bight, North Atlantic Ocean, North Pacific Ocean, Norwegian Sea, Skagerrak, and White Sea from 2014-05-16 to 2014-09-29. These data include Carbon, Nitrogen, abundance, salinity calculated from CTD primary sensors, and water temperature. The instruments used to collect these data include Automated DNA Sequencer, CHN Elemental Analyzer, PCR Thermal Cycler, Refractometer, and Temperature Logger. These data were collected by Dr Kevin Hovel of San Diego State University, Dr J Emmett Duffy of Smithsonian Institution, Dr Pamela L Reynolds of University of California-Davis, and John J. Stachowicz of University of California-Irvine as part of the "Global biodiversity and functioning of eelgrass ecosystems (Zostera Experimental Network 2) (ZEN 2)" project. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2021-04-19. The following is the text of the dataset description provided by BCO-DMO: Eelgrass 2014 Site Survey Data Dataset Description: Acquisition Description: Twenty meter square plots (2 meters apart) were sampled at 50 eelgrass meadows ("sites") in summer 2014. Abiotic parameters were quantified in situ and/or using local monitoring station data. The epifaunal community was quantified as in Duffy et al. 2015. Seagrass density was quantified in 20cm diameter rings, and dry mass from 20 cm diameter cores which captured all above ground mass, and below ground to a depth of 20 cm. A three centimeter section from each of 5 shoots per plot was quantified for leaf carbon and nitrogen (processed at the Virginia Institute of Marine Science), while another 3 cm section was utilized for plant genetic analyses (processed by J. Olsen at the University of Groningen). Additional details are included in the Zostera Experimental Network 2014 survey handbook protocol, available upon request. Methodology is available from: J. Emmett Duffy, et al. Biodiversity mediates top-down control in eelgrass ecosystems: A global comparative-experimental approach. 2015. Ecology Letters 18:7 (696–705). https://doi.org/10.1111/ele.12448 .
purpose: This dataset is available to the public for a wide variety of uses including scientific research and analysis.
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contactInfo: (CI_Contact)
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linkage: http://lod.bco-dmo.org/id/affiliation/191
protocol: HTTP
name: website
description: Institution web page
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citedResponsibleParty: (CI_ResponsibleParty)
individualName:
Anchor: http://lod.bco-dmo.org/id/person/472212 Duffy, J. Emmett
organisationName:
Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1475 Smithsonian Institution
contactInfo: (CI_Contact)
address: (CI_Address)
electronicMailAddress: info@si.edu
onlineResource: (CI_OnlineResource)
linkage: http://lod.bco-dmo.org/id/person/472212
protocol: HTTP
name: Smithsonian website
description: Institution web page
function: (CI_OnLineFunctionCode) information
role: (CI_RoleCode) author
citedResponsibleParty: (CI_ResponsibleParty)
individualName:
Anchor: http://lod.bco-dmo.org/id/person/528210 Hovel, Kevin Alexander
organisationName:
Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/237 San Diego State University
contactInfo: (CI_Contact)
onlineResource: (CI_OnlineResource)
linkage: http://lod.bco-dmo.org/id/person/528210
protocol: HTTP
name: San Diego State University website
description: Institution web page
function: (CI_OnLineFunctionCode) information
role: (CI_RoleCode) author
citedResponsibleParty: (CI_ResponsibleParty)
individualName:
Anchor: http://lod.bco-dmo.org/id/person/518660 Stachowicz, John J.
organisationName:
Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/740 University of California-Irvine
contactInfo: (CI_Contact)
onlineResource: (CI_OnlineResource)
linkage: http://lod.bco-dmo.org/id/person/518660
protocol: HTTP
name: UC Irvine website
description: Institution web page
function: (CI_OnLineFunctionCode) information
role: (CI_RoleCode) author
citedResponsibleParty: (CI_ResponsibleParty)
individualName:
Anchor: http://lod.bco-dmo.org/id/person/472213 Reynolds, Pamela L
organisationName:
Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1445 University of California-Davis
contactInfo: (CI_Contact)
onlineResource: (CI_OnlineResource)
linkage: http://lod.bco-dmo.org/id/person/472213
protocol: HTTP
name: UC Davis website
description: Institution web page
function: (CI_OnLineFunctionCode) information
role: (CI_RoleCode) author
citedResponsibleParty: (CI_ResponsibleParty)
organisationName:
Anchor: https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1416 Biological and Chemical Oceanography Data Management Office (BCO-DMO)
contactInfo: (CI_Contact)
onlineResource: (CI_OnlineResource)
linkage: http://bcodmo.org
protocol: HTTP
name: Biological and Chemical Oceanography Data Management Office website
description: Institution web page
function: (CI_OnLineFunctionCode) information
role: (CI_RoleCode) publisher
presentationForm: (CI_PresentationFormCode) tableDigital
associationType: (DS_AssociationTypeCode) crossReference
initiativeType: (DS_InitiativeTypeCode) collection
language:
LanguageCode: eng; USA
characterSet: (MD_CharacterSetCode) utf8
topicCategory: (MD_TopicCategoryCode) environment
topicCategory: (MD_TopicCategoryCode) oceans
topicCategory: (MD_TopicCategoryCode) biota
extent: (EX_Extent)
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westBoundLongitude: 128.02
eastBoundLongitude: 34.002
southBoundLatitude: 30.42
northBoundLatitude: 67.267
temporalElement: (EX_TemporalExtent)
extent:
TimePeriod:
beginPosition: 2014-05-16
endPosition: 2014-09-29
supplementalInformation: (missing)
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distributionInfo: (MD_Distribution)
distributor: (MD_Distributor)
distributorContact: (CI_ResponsibleParty)
organisationName:
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contactInfo: (CI_Contact)
phone: (CI_Telephone)
voice: +1-301-713-3277
address: (CI_Address)
electronicMailAddress: NCEI.Info@noaa.gov
role: (CI_RoleCode) pointOfContact
distributionOrderProcess: (MD_StandardOrderProcess)
fees: In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
orderingInstructions: Contact NCEI for other distribution options and instructions.
distributorFormat: (MD_Format)
name: TSV
version: (unknown)
distributorTransferOptions: (MD_DigitalTransferOptions)
transferSize:
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onLine: (CI_OnlineResource)
linkage: https://www.ncei.noaa.gov/archive/accession/0278038
protocol: HTTPS
applicationProfile: Web browser
name: NCEI Dataset Landing Page
description: Navigate directly to the URL for a descriptive web page with download links.
function: (CI_OnLineFunctionCode) information
onLine: (CI_OnlineResource)
linkage: https://www.ncei.noaa.gov/archive/accession/oas/278038
protocol: HTTPS
applicationProfile: Web browser
name: Descriptive Information
description: Navigate directly to the URL for a descriptive web page with download links.
function: (CI_OnLineFunctionCode) information
onLine: (CI_OnlineResource)
linkage: https://www.ncei.noaa.gov/archive/accession/download/278038
protocol: HTTPS
applicationProfile: Web browser
name: HTTPS
description: Navigate directly to the URL for data access and direct download.
function: (CI_OnLineFunctionCode) download
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linkage: ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0212/0278038/
protocol: FTP
applicationProfile: Any FTP client
name: FTP
description: These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
function: (CI_OnLineFunctionCode) download
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dataQualityInfo: (DQ_DataQuality)
scope: (DQ_Scope)
level: (MD_ScopeCode) dataset
lineage: (LI_Lineage)
processStep: (LE_ProcessStep)
description: NCEI Accession 0278038 v1.1 was published.
dateTime:
DateTime: 2023-05-11T05:08:37Z
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individualName: (inapplicable)
contactInfo: (CI_Contact)
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protocol: HTTPS
name: NCEI Accession 0278038 v1.1
description: published 2023-05-11T05:08:37Z
function: (CI_OnLineFunctionCode) download
role: (inapplicable)
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metadataMaintenance: (MD_MaintenanceInformation)
maintenanceAndUpdateFrequency: (MD_MaintenanceFrequencyCode) asNeeded
maintenanceNote: Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
contact: (CI_ResponsibleParty)
organisationName: NOAA National Centers for Environmental Information
role: (CI_RoleCode) custodian
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acquisitionInformation: (MI_AcquisitionInformation)
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: CHN Analyzer
type: CHN Analyzer
description: Carbon, Hydrogen, and Nitrogen Analyzer Instrument used for measuring carbon, hydrogen, and nitrogen in organic and other types of materials.
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: PCR machine
type: PCR machine
description: thermal cycler, thermocycler, PCR machine, DNA amplifier The thermal cycler (also known as a thermocycler, PCR machine or DNA amplifier) is a laboratory apparatus most commonly used to amplify segments of DNA via the polymerase chain reaction (PCR). https://en.wikipedia.org/wiki/Thermal_cycler, 2017-05-02.
instrument: (MI_Instrument)
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code: refractometer
type: refractometer
description: refractometer
instrument: (MI_Instrument)
identifier: (MD_Identifier)
code: temperature probe
type: temperature probe
description: For example, OMEGA temperature probe PR-11-2-100-1/8-6-e Vaisala HUMICAP® Humidity and Temperature Probe HMP155
