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Dataset Overview | National Centers for Environmental Information (NCEI)

Multistressor Observations of Coastal Hypoxia and Acidification (MOCHA) Synthesis (NCEI Accession 0277984)

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The California Current System (CCS) is a highly complex upwelling system supporting productive fisheries and high biodiversity, but it is vulnerable to warming, deoxygenation, and acidification. Data fragmentation and limited data availability constrain our understanding of when and where stressful coastal conditions manifest. Here, we present a large synthesis of compiled, formatted, and quality-controlled publicly available temperature, dissolved oxygen, and carbonate-system observations to create an accessible, high-resolution database for mapping marine climate stress in U.S. waters along the CCS. Only direct observations were included in this synthesis; no calculated data was retained. The synthesis includes 71 distinct data sources with observations from high resolution autonomous sensors, synoptic oceanographic cruises, and shore samples. Data has been organized across 16.2 million rows and 41 columns. Each row includes one or more individual oceanic parameter measurements accompanied by a dataset ID, which ties observations to their sources in the accompanying dataset Metadata Table, spatial and temporal information about the observations, the data collection method (cruise, mooring, etc.), and a habitat tag to identify estuarine datasets. Rows also include temperature, salinity, dissolved oxygen, carbonate-system, nutrient, and chlorophyll observations as available, along with quality flags and data collection methods for each included observation. Overall, this synthesis includes 15.9 million temperature observations, 5.0 million salinity, 3.9 million dissolved oxygen, 2.3 million pH, 8,368 dissolved inorganic carbon, 10,144 total alkalinity, and 505,000 pCO2/fCO2 observations, with limited additional chlorophyll and nutrient observations. A summary dataset that provides daily averages of observations by location, depth, and project is also available (aggregated_daily_dataset.csv), along with geographic subsets of the full dataset. This synthesis dataset has been optimized for high-resolution coastal multiparameter investigations and will provide a valuable tool for assessing regional and local climate risk, evaluating the efficacy and completeness of CCS monitoring efforts, and investigating spatiotemporal scales of coastal oceanographic variability.
  • Cite as: Kennedy, Esther G.; Zulian, Meghan; Hamilton, Sara L.; Hill, Tessa M.; Delgado, Manuel; Fish, Carina R.; Gaylord, Brian; Kroeker, Kristy J.; Palmer, Hannah M.; Ricart, Aurora M.; Sanford, Eric; Spalding, Ana K.; Ward, Melissa A.; Carrasco, Guadalupe; Elliott, Meredith; Grisby, Genece V.; Harris, Evan; Jahncke, Jaime; Rocheleau, Catherine N.; Westerink, Sebastian; Wilmot, Maddie I. (2023). Multistressor Observations of Coastal Hypoxia and Acidification (MOCHA) Synthesis (NCEI Accession 0277984). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/2vve-fh39. Accessed [date].
gov.noaa.nodc:0277984
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Distribution Formats
  • Originator data format
Ordering Instructions Contact NCEI for other distribution options and instructions.
Distributor NOAA National Centers for Environmental Information(link is external)
+1-301-713-3277
ncei.info@noaa.gov
Dataset Point of Contact NOAA National Centers for Environmental Information(link is external)
ncei.info@noaa.gov
Time Period 1949-02-28 to 2022-12-31
Spatial Bounding Box Coordinates
West: -150
East: -117.2
South: 32
North: 48.49
Spatial Coverage Map
General Documentation
Associated Resources
Publication Dates
  • publication: 2023-05-22
  • revision: 2024-05-22
Data Presentation Form Digital table - digital representation of facts or figures systematically displayed, especially in columns
Dataset Progress Status Complete - production of the data has been completed
Historical archive - data has been stored in an offline storage facility
Data Update Frequency As needed
Supplemental Information
The total size of the data file MOCHA_full_dsp.csv is 2.67 GB, the zip file size is 118.6 MB.

Split files were created and separated by regions and date located in the subset_data directory:
30_to_40_post_2016.csv
30_to_40_pre_2016.csv
32_to_34_post_2016.csv
32_to_34_pre_2016.csv
34.25_to_35_post_2016.csv
34.25_to_35_pre_2016.csv
34_to_34.25_post_2016.csv
34_to_34.25_pre_2016.csv
35_to_36_post_2016.csv
35_to_36_pre_2016.csv
36.5_to_37_post_2016.csv
36.5_to_37_pre_2016.csv
36_to_36.5_post_2016.csv
36_to_36.5_pre_2016.csv
37_to_38_post_2016.csv
37_to_38_pre_2016.csv
40_to_42_post_2016.csv
40_to_42_pre_2016.csv
42_to_43_post_2016.csv
42_to_43_pre_2016.csv
43_to_44_post_2016.csv
43_to_44_pre_2016.csv
44_to_45_post_2016.csv
44_to_45_pre_2016.csv
45_to_47_post_2016.csv
45_to_47_pre_2016.csv
47_to_49_post_2016.csv
47_to_49_pre_2016.csv
Purpose Improve access to coastal acidification and hypoxia observations for the U.S. West Coast for high-resolution spatiotemporal stress and risk analyses.
Use Limitations
  • accessLevel: Public
  • Distribution liability: NOAA and NCEI make no warranty, expressed or implied, regarding these data, nor does the fact of distribution constitute such a warranty. NOAA and NCEI cannot assume liability for any damages caused by any errors or omissions in these data. If appropriate, NCEI can only certify that the data it distributes are an authentic copy of the records that were accepted for inclusion in the NCEI archives.
Dataset Citation
  • Cite as: Kennedy, Esther G.; Zulian, Meghan; Hamilton, Sara L.; Hill, Tessa M.; Delgado, Manuel; Fish, Carina R.; Gaylord, Brian; Kroeker, Kristy J.; Palmer, Hannah M.; Ricart, Aurora M.; Sanford, Eric; Spalding, Ana K.; Ward, Melissa A.; Carrasco, Guadalupe; Elliott, Meredith; Grisby, Genece V.; Harris, Evan; Jahncke, Jaime; Rocheleau, Catherine N.; Westerink, Sebastian; Wilmot, Maddie I. (2023). Multistressor Observations of Coastal Hypoxia and Acidification (MOCHA) Synthesis (NCEI Accession 0277984). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/2vve-fh39. Accessed [date].
Cited Authors
Principal Investigators
Collaborators
  • Sebastian Westerink
  • Meredith Elliott
  • Melissa A. Ward
  • Manuel Delgado
  • Maddie I. Wilmot
  • Kristy J. Kroeker
  • Jaime Jahncke
  • Hannah M. Palmer
  • Guadalupe Carrasco
  • Genece V. Grisby
  • Evan Harris
  • Eric Sanford
  • Catherine N. Rocheleau
  • Carina R. Fish
  • Brian Gaylord
  • Aurora M. Ricart
  • Ana K. Spalding
Contributors
Resource Providers
Publishers
Acknowledgments
  • Funding Information: CA Ocean Protection Council, Lenfest Ocean Program, NOAA Ocean Acidification Program, Packard Foundation, National Park Service
Theme keywords NODC DATA TYPES THESAURUS NODC OBSERVATION TYPES THESAURUS WMO_CategoryCode
  • oceanography
Global Change Master Directory (GCMD) Science Keywords OCADS Study Type
  • Data synthesis product
  • Discrete measurement
Provider Variable Abbreviations
  • chl_flag
  • chl_type
  • chl_ugL
  • coastal_environment
  • dataset_id
  • depth_m
  • distance_offshore
  • do_flag
  • do_sat
  • do_type
  • do_umolkg
  • fCO2_flag
  • fCO2_type
  • fCO2_uatm
  • latitude
  • longitude
  • nh4_umolkg
  • no2_umolkg
  • no3_umolkg
  • nutr_flag
  • nutr_type
  • pCO2_flag
  • pCO2_type
  • pCO2_uatm
  • pH_flag
  • pH_total
  • pH_type
  • po4_umolkg
  • sal_flag
  • sal_pss
  • sample_scheme
  • si_umolkg
  • tCO2_flag
  • tCO2_type
  • tCO2_umolkg
  • t_C
  • t_flag
  • ta_flag
  • ta_type
  • ta_umolkg
  • time_utc
Data Center keywords NODC COLLECTING INSTITUTION NAMES THESAURUS NODC SUBMITTING INSTITUTION NAMES THESAURUS
Platform keywords NODC PLATFORM NAMES THESAURUS
Instrument keywords NODC INSTRUMENT TYPES THESAURUS Global Change Master Directory (GCMD) Instrument Keywords
Place keywords NODC SEA AREA NAMES THESAURUS Global Change Master Directory (GCMD) Location Keywords Provider Geographic Names
  • North Pacific Ocean
  • West Coast of the United States
Project keywords NODC PROJECT NAMES THESAURUS Ocean Acidification Search Keywords
  • Ocean Acidification Program (OAP)
  • Ocean Carbon and Acidification Data System (OCADS) Project
Keywords NCEI ACCESSION NUMBER
Use Constraints
  • Cite as: Kennedy, Esther G.; Zulian, Meghan; Hamilton, Sara L.; Hill, Tessa M.; Delgado, Manuel; Fish, Carina R.; Gaylord, Brian; Kroeker, Kristy J.; Palmer, Hannah M.; Ricart, Aurora M.; Sanford, Eric; Spalding, Ana K.; Ward, Melissa A.; Carrasco, Guadalupe; Elliott, Meredith; Grisby, Genece V.; Harris, Evan; Jahncke, Jaime; Rocheleau, Catherine N.; Westerink, Sebastian; Wilmot, Maddie I. (2023). Multistressor Observations of Coastal Hypoxia and Acidification (MOCHA) Synthesis (NCEI Accession 0277984). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://doi.org/10.25921/2vve-fh39. Accessed [date].
Access Constraints
  • Use liability: NOAA and NCEI cannot provide any warranty as to the accuracy, reliability, or completeness of furnished data. Users assume responsibility to determine the usability of these data. The user is responsible for the results of any application of this data for other than its intended purpose.
Fees
  • In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
Lineage information for: dataset
Processing Steps
  • 2023-05-22T19:41:32Z - NCEI Accession 0277984 v1.1 was published.
  • 2023-09-08T06:43:48Z - NCEI Accession 0277984 was revised and v2.2 was published.
    Rationale: Updates were received for this dataset. These updates were copied into the data/0-data/ directory of this accession. These updates may provide additional files or replace obsolete files. This version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession.
  • 2024-05-22T22:00:10Z - NCEI Accession 0277984 was revised and v3.3 was published.
    Rationale: Updates were received for this dataset. These updates were copied into the data/0-data/ directory of this accession. These updates may provide additional files or replace obsolete files. This version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession.
Output Datasets
Lineage information for: dataset
Processing Steps
  • Parameter or Variable: Dissolved Inorganic Carbon; Abbreviation: tCO2_umolkg; Unit: umol/kg; Observation type: Discrete; Measured or calculated: Measured; Sampling instrument: CTD and Niskin bottles or hand-collected bottles; Detailed sampling and analyzing information: Discrete samples collected across through cruise and shore-side projects. All samples preserved with mercuric chloride and analyzed in a laboratory according to best practices.; Quality flag convention: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Total alkalinity; Abbreviation: ta_umolkg; Unit: umol/kg; Observation type: Discrete; Measured or calculated: Measured; Sampling instrument: CTD and Niskin bottles or hand-collected bottles; Quality flag convention: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: pH; Abbreviation: pH_total; pH scale: Total scale; Observation type: Discrete samples and autonomous sensors; Measured or calculated: Measured; Sampling instrument: Discrete: CTD and Niskin or handheld bottles. Autonomous sensors: Seabird SeapHOx, Seabird SeaFET, or Sunburst SAMI-pH; At what temperature was pH reported: In-situ temperature, salinity, and pressure.; Quality flag convention: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: pCO2 (fCO2) autonomous; Abbreviation: pCO2_uatm; Unit: uatm; Observation type: Autonomous sensors; Measured or calculated: Measured; Sampling instrument: MAPCO2 moorings or Sunburst SAMI pCO2 instruments; Quality flag convention: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Source dataset identification number; Abbreviation: dataset_id; Unit: Integer; Detailed sampling and analyzing information: Integer value that links each observation in this synthesis product to its source dataset, references and citations, and daset description in the Metadata Table..
  • Parameter or Variable: Latitude; Abbreviation: latitude; Unit: Decimal degrees.
  • Parameter or Variable: Longitude; Abbreviation: longitude; Unit: Decimal degrees.
  • Parameter or Variable: Overall observation collection method; Abbreviation: sample_scheme; Unit: "cruise", "mooring", "intertidal/subtidal sensor deployment", "intertidal/subtidal hand collection"; Detailed sampling and analyzing information: Overall observation collection method applied by dataset. "Intertidal/subtidal sensor deployment" applies to sensors accessed either from shore or by nearshore divers, whereas "moorings" are attached to bouys..
  • Parameter or Variable: Environmental designation applied by observation; Abbreviation: coastal_environment; Unit: "estuarine" or "oceanic"; Detailed sampling and analyzing information: Variable to easily differentiate observations from semi-restricted lagoons and bays (e.g., Humboldt Bay) and large estuaries (e.g., the Columbia River estuary) from open coast observations. Applied based on mapped observation location..
  • Parameter or Variable: Distance from shore; Abbreviation: distance_offshore; Unit: km.
  • Parameter or Variable: Observation depth; Abbreviation: depth_m; Unit: m.
  • Parameter or Variable: Observation date and time; Abbreviation: time_utc; Unit: date-time in UTC; Detailed sampling and analyzing information: Date and time of sample collection in the format "YYYY-MM-DD HH:MM:SS". Times are approximated for data sources that did not include sample collection times..
  • Parameter or Variable: Temperature; Abbreviation: t_C; Unit: Degrees Celcius.
  • Parameter or Variable: Temperature quality flag; Abbreviation: t_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Salinity; Abbreviation: sal_pss; Unit: Practial salinity scale.
  • Parameter or Variable: Salinity quality flag; Abbreviation: sal_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: In-situ pH on the total scale; Abbreviation: pH_total; Observation type: Measured; Sampling instrument: Discrete samples or autonomous sensors; Detailed sampling and analyzing information: All discrete samples preserved with mercuric chloride and analyzed in a laboratory according to best practices..
  • Parameter or Variable: pH quality flag; Abbreviation: pH_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Method of pH data collection; Abbreviation: pH_type; Unit: "discrete", "autonomous sensor", "CTD"; Sampling instrument: Discrete: CTD and Niskin or handheld bottles. Autonomous sensors: Seabird SeapHOx, Seabird SeaFET, or Sunburst SAMI-pH; Detailed sampling and analyzing information: Simplified pH collection method. For autonomous sensors, detailed sensor information is available in the accompanying Metadata Table..
  • Parameter or Variable: Seawater in-situ pCO2; Abbreviation: pCO2_uatm; Unit: uatm; Observation type: Measured; Sampling instrument: Autonomous sensors.
  • Parameter or Variable: pCO2 quality flag; Abbreviation: pCO2_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Method of pCO2 data collection; Abbreviation: pCO2_type; Unit: "autonomous sensor"; Sampling instrument: Autonomous sensors: MAPCO2, Sunburst SAMI pCO2; Detailed sampling and analyzing information: Simplified pCO2 collection method. Currently, all pCO2 observations are from autonomous sensors, but updates to this dataset could include underway ship observations. Detailed sensor information is available in the accompanying Metadata Table..
  • Parameter or Variable: Method of pCO2 data collection; Abbreviation: fCO2_uatm; Unit: "autonomous sensor"; Observation type: Measured; Sampling instrument: MAPCO2.
  • Parameter or Variable: fCO2 quality flag; Abbreviation: fCO2_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Method of fCO2 data collection; Abbreviation: fCO2_type; Unit: "autonomous sensor"; Sampling instrument: MAPCO2; Detailed sampling and analyzing information: Simplified fCO2 collection method. Currently, all fCO2 observations are from autonomous sensors, but updates to this dataset could include underway ship observations. Detailed sensor information is available in the accompanying Metadata Table..
  • Parameter or Variable: Total inorganic carbon (TCO2 or DIC); Abbreviation: tCO2_umolkg; Unit: umol/kg; Observation type: Measured; Sampling instrument: Discrete samples; Detailed sampling and analyzing information: Discrete samples collected across a variety of cruise and shore-side projects. All samples preserved with mercuric chloride and analyzed in a laboratory according to best practices..
  • Parameter or Variable: Total inorganic carbon (TCO2 or DIC) quality flag; Abbreviation: tCO2_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Method of total inorganic carbon (TCO2 or DIC) data collection; Abbreviation: tCO2_type; Unit: "discrete"; Sampling instrument: CTD and Niskin or handheld bottles..
  • Parameter or Variable: Total alkalinity; Abbreviation: ta_umolkg; Unit: Measured; Observation type: Discrete samples; Analyzing instrument: Discrete samples collected across a variety of cruise and shore-side projects. All samples preserved with mercuric chloride and analyzed in a laboratory according to best practices..
  • Parameter or Variable: Total alkalinity quality flag; Abbreviation: ta_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Method of total alkalinity data collection; Abbreviation: ta_type; Unit: "discrete"; Sampling instrument: CTD and Niskin or handheld bottles..
  • Parameter or Variable: Dissolved oxygen concentration; Abbreviation: do_umolkg; Unit: umol/kg; Observation type: Measured; Sampling instrument: Discrete samples, CTD casts, autonomous sensors, and handheld sensors.
  • Parameter or Variable: Dissolved oxygen saturation state; Abbreviation: do_sat; Unit: Percent saturation; Observation type: Measured; Sampling instrument: Discrete samples, CTD casts, autonomous sensors, and handheld sensors.
  • Parameter or Variable: Dissolved oxygen quality flag; Abbreviation: do_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data. Applied across both dissolved oxygen observations..
  • Parameter or Variable: Method of dissolved oxygen data collection; Abbreviation: do_type; Unit: "discrete", "autonomous sensor", "CTD", "handheld sensor"; Sampling instrument: Discrete: CTD and Niskin or handheld bottles. CTD cast: shipside profiles taken with an optical or electrochemical sensor. Autonomous sensors: stationary electrochemical and optical sensors. Handheld sensors: glass electrode handheld sensors.; Detailed sampling and analyzing information: Simplified dissolved oxygen collection method. For autonomous and handheld sensors, detailed sensor information is available in the accompanying Metadata Table..
  • Parameter or Variable: Chlorophyll a concentration; Abbreviation: chl_ugL; Unit: ug/L; Observation type: Measured; Sampling instrument: Discrete samples, autonomous sensors, and handheld sensors.
  • Parameter or Variable: Chlorophyll a quality flag; Abbreviation: chl_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data..
  • Parameter or Variable: Method of chlorophyll a data collection; Abbreviation: chl_type; Unit: "discrete", "autonomous sensor", "handheld sensor"; Analyzing instrument: Discrete: CTD and Niskin or handheld bottles. Autonomous sensors: WET STAR Eco FLNTUS. Handheld sensors: YSI probes.
  • Parameter or Variable: Silica concentration; Abbreviation: si_umolkg; Unit: umol/kg; Observation type: Discrete samples.
  • Parameter or Variable: Ammonia and ammonium concentration; Abbreviation: nh4_umolkg; Unit: umol/kg; Observation type: Discrete samples.
  • Parameter or Variable: Nitrate concentration; Abbreviation: no3_umolkg; Unit: umol/kg; Observation type: Discrete samples.
  • Parameter or Variable: Nitrite concentration; Abbreviation: no2_umolkg; Unit: umol/kg; Observation type: Discrete samples.
  • Parameter or Variable: Phosphate concentration (H3PO4, H2PO4, HPO42); Abbreviation: po4_umolkg; Unit: umol/kg; Observation type: Discrete samples.
  • Parameter or Variable: Nutrients quality flag; Abbreviation: nutr_flag; Unit: 1, 3, or NA; Detailed sampling and analyzing information: 1 = data identified as "reliable" by original investigators and not identified as a significant outlier during secondary QC by this project team. 3 = data flagged by original investigators as unreliable and/or identified as a significant outlier during secondary QC. NA = no data. Applied across all nutrient types..
  • Parameter or Variable: Method for dissolved nutrients data collection; Abbreviation: nutr_type; Unit: "discrete" .
Acquisition Information (collection)
Instrument
  • carbon dioxide (CO2) gas analyzer
Platform
  • VARIOUS CHARTERED VESSELS
Last Modified: 2025-02-21T13:27:47Z
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