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National Coral Reef Monitoring Program: Assessment of coral reef benthic communities in Puerto Rico from 2021-04-30 to 2021-12-24 (NCEI Accession 0272313)


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            title:  National Coral Reef Monitoring Program: Assessment of coral reef benthic communities in Puerto Rico from 2021-04-30 to 2021-12-24 (NCEI Accession 0272313)
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        abstract:  The National Coral Reef Monitoring Program (NCRMP) assessed coral reef communities in Puerto Rico using two benthic surveys: the Benthic Assessment (BA) and the Coral Demographic method. Benthic Assessment provides benthic cover estimates for ecologically important cover types/groups (e.g., macroalgae, turf algae, crustose coralline algae, corals, sponges, sand/sediment, etc.) using a 1-stage stratified random survey design in hardbottom and coral reef habitats less than 30m in depth. The goals of these surveys are to provide: (1) a quantification of percent cover of biotic and abiotic benthic components using a line point-intercept (LPI) method; (2) information on topographic complexity substratum rugosity) of the survey locations (3) quantitative information on local commercially and ecologically-important macroinvertebrates (Caribbean spiny lobster [Panulirus argus], queen conch [Lobatus gigas], long-spined sea urchin [Diadema antillarum]); and (4) presence-absence information for ESA-listed Threatened corals. The goal of the coral demographic surveys is to collect and report information on species composition, density, size, abundance, and specific parameters of condition (% live vs. dead, bleaching, disease) of non-juvenile scleractinian corals (>4 cm maximum diameter), and of overall species diversity (all corals) using 10m x 1m belt transects in a stratified random sampling design in hardbottom and coral reef habitats less than 30m in depth. Both Benthic Assessment and Coral Demographic surveys are concurrent. Three datasets are provided under the Benthic Assessment and coral demographic protocols, and are distributed as one compiled package: (1) analysis ready benthic cover dataset, (2) analysis ready invertebrates/ESA dataset, and (3) analysis ready coral demographic dataset. The methodologies used for this survey can be found in the Benthic Assessment and Coral Demographic protocols. All datasets contain data fields on general station information (e.g., survey strata, depth, rugosity). Each of these data tables contain additional survey-specific data fields. For complete information and descriptions of attributes and data fields for all data tables, refer to the data dictionaries.
        purpose:  The National Coral Reef Monitoring Program (NCRMP) details a long-term approach to provide an ecosystem perspective via monitoring climate, fish, benthic, and socioeconomic variables in a consistent and integrated manner. The NCRMP is intended to coordinate various Coral Reef Conservation Coral Reef Program (CRCP) biological, physical, and human dimensions activities into a cohesive NOAA-wide effort. Through the implementation of the NCRMP, NOAA will be able to clearly and concisely communicate results of national-scale monitoring to national, state, and territorial policy makers, resource managers, and the public on a periodic basis. NCRMP is a framework for conducting sustained observations of biological, climate, and socioeconomic indicators at 10 priority coral reefs across the U.S. and its territories. This integrated approach will consolidate monitoring of coral reefs under a uniform method in the Pacific, Atlantic, Caribbean, and the Gulf of Mexico for the first time. NCRMP is funded by the NOAA Coral Reef Conservation Program (CRCP) and supported by NOAA National Centers for Coastal Ocean Science (NCCOS) and many other partners. NCCOS is co-leading biological monitoring missions with NOAA’s Southeast Fisheries Science Center (SEFSC) to gather data on fish populations and coral reef communities in the U.S. Caribbean, Florida, and the Gulf of Mexico. Each year, our scientists work closely with CRCP and local partners to collect biological data from thousands of strategically selected sites. We then use innovative analysis techniques to develop products that give fellow scientists, managers, decision makers and the public a better understanding of a region’s resources and how they are changing over time. The biological component of NCRMP provides a biennial ecological characterization at a broad spatial scale of general reef condition for reef fishes, corals and benthic habitat (i.e., fish species composition/density/size, benthic cover, and coral density/size/condition). Data collection occurs at stratified random sites where the sampling domain for each region is partitioned by habitat type and depth, sub-regional location (e.g., along-shelf position) and management zone. Data provided in this dataset are from around Puerto Rico, including the islands of Vieques, Culebra, Mona and Desecheo. Lead agencies NOAA NCCOS and SEFSC, and partners HJR Reefscaping, Inc., CSS, the University of Puerto Rico and Puerto Rico Department of Natural and Environmental Resources.
        credit:  Related Funding Agency: US DOC; NOAA; NOS; Coral Reef Conservation Program
        credit:  Related Funding Agency: US DOC; NOAA; NOS; National Centers for Coastal Ocean Science
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                      Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1714 Coral Reef Conservation Program
                    contactInfo:  (CI_Contact)
                        address:  (CI_Address)
                            electronicMailAddress:  coralreef@noaa.gov
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://coralreef.noaa.gov
                            protocol:  HTTPS
                            name:  Coral Reef Conservation Program website
                            description:  Institution web page
                            function:  (CI_OnLineFunctionCode) information
                    role:  (CI_RoleCode) author
                citedResponsibleParty:  (CI_ResponsibleParty)
                    organisationName:
                      Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 US DOC; NOAA; NESDIS; National Centers for Environmental Information (NCEI)
                    role:  (CI_RoleCode) publisher
                presentationForm:  (CI_PresentationFormCode) documentDigital
            associationType:  (DS_AssociationTypeCode) crossReference
            initiativeType:  (DS_InitiativeTypeCode) collection
        aggregationInfo:  (MD_AggregateInformation)
            aggregateDataSetName:  (CI_Citation)
                title:  NOAA's National Coral Reef Monitoring Program
                date:  (CI_Date)
                    date:  2022
                    dateType:  (CI_DateTypeCode) publication
                citedResponsibleParty:  (CI_ResponsibleParty)
                    positionName: (unknown)
                    contactInfo:  (CI_Contact)
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://www.coris.noaa.gov/monitoring/
                            protocol:  HTTPS
                            name: https://www.coris.noaa.gov/monitoring/
                            description:  National Coral Reef Monitoring Program (NCRMP) Project Web Page
                            function:  (CI_OnLineFunctionCode) information
                    role: (unknown)
            associationType:  (DS_AssociationTypeCode) crossReference
            initiativeType:  (DS_InitiativeTypeCode) project
        aggregationInfo:  (MD_AggregateInformation)
            aggregateDataSetName:  (CI_Citation)
                title:  National Coral Reef Monitoring Program Implementation: Biological and Socioeconomic Monitoring
                date:  (CI_Date)
                    date:  2013
                    dateType:  (CI_DateTypeCode) publication
                citedResponsibleParty:  (CI_ResponsibleParty)
                    positionName: (unknown)
                    contactInfo:  (CI_Contact)
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://coastalscience.noaa.gov/project/national-coral-reef-monitoring-program-biological-socioeconomic/
                            protocol:  HTTPS
                            name: https://coastalscience.noaa.gov/project/national-coral-reef-monitoring-program-biological-socioeconomic/
                            description:  National Centers for Coastal Ocean Science (NCCOS) project page
                            function:  (CI_OnLineFunctionCode) information
                    role: (unknown)
                citedResponsibleParty:  (CI_ResponsibleParty)
                    organisationName:
                      Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1466 US DOC; NOAA; NOS; National Centers for Coastal Ocean Science (NCCOS)
                    contactInfo:  (CI_Contact)
                        address:  (CI_Address)
                            electronicMailAddress:  NCCOS.data@noaa.gov
                        onlineResource:  (CI_OnlineResource)
                            linkage: http://coastalscience.noaa.gov/
                            protocol:  HTTP
                            name:  US DOC; NOAA; NOS; National Centers for Coastal Ocean Science website
                            description:  Institution web page
                            function:  (CI_OnLineFunctionCode) information
                    role:  (CI_RoleCode) publisher
                presentationForm:  (CI_PresentationFormCode) documentDigital
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                title:  OBIS USA: NCRMP Benthic Variables in Darwin Core Format
                date:  (CI_Date)
                    date:  2023
                    dateType:  (CI_DateTypeCode) publication
                citedResponsibleParty:  (CI_ResponsibleParty)
                    positionName: (unknown)
                    contactInfo:  (CI_Contact)
                        onlineResource:  (CI_OnlineResource)
                            linkage: https://obis.org/institute/23174
                            protocol:  HTTPS
                            name:  OBIS USA: NCRMP Benthic Variables in Darwin Core Format
                            description:  Hard coral species percent cover and species abundance data are available in Darwin Core format for Atlantic/Caribbean sampling sites through OBIS USA.
                            function:  (CI_OnLineFunctionCode) information
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            associationType:  (DS_AssociationTypeCode) crossReference
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          LanguageCode:  eng; USA
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        topicCategory:  (MD_TopicCategoryCode) environment
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        topicCategory:  (MD_TopicCategoryCode) biota
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                northBoundLatitude:  18.41538
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                extent:
                  TimePeriod:
                    beginPosition:  2021-04-30
                    endPosition:  2021-12-24
        supplementalInformation:  Submission Package ID: KKDA3F
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                organisationName:
                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
                contactInfo:  (CI_Contact)
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                        voice:  +1-301-713-3277
                    address:  (CI_Address)
                        electronicMailAddress:  NCEI.Info@noaa.gov
                role:  (CI_RoleCode) pointOfContact
            distributionOrderProcess:  (MD_StandardOrderProcess)
                fees:  In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
                orderingInstructions:  Contact NCEI for other distribution options and instructions.
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                    linkage: https://www.ncei.noaa.gov/archive/accession/0272313
                    protocol:  HTTPS
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                    name:  NCEI Dataset Landing Page
                    description:  Navigate directly to the URL for a descriptive web page with download links.
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                    linkage: https://www.ncei.noaa.gov/archive/accession/oas/272313
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                    description:  Navigate directly to the URL for data access and direct download.
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                    linkage: ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0209/0272313/
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                    name:  FTP
                    description:  These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
                    function:  (CI_OnLineFunctionCode) download
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                description:  NCEI Accession 0272313 v1.1 was published.
                dateTime:
                  DateTime:  2022-12-02T15:44:00Z
                output:  (LE_Source)
                    sourceCitation:  (CI_Citation)
                        title:  NCEI Accession 0272313 v1.1
                        date:  (CI_Date)
                            date: (inapplicable)
                            dateType:  (CI_DateTypeCode) publication
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                            individualName: (inapplicable)
                            contactInfo:  (CI_Contact)
                                onlineResource:  (CI_OnlineResource)
                                    linkage: https://www.ncei.noaa.gov/archive/accession/0272313/1.1
                                    protocol:  HTTPS
                                    name:  NCEI Accession 0272313 v1.1
                                    description:  published 2022-12-02T15:44:00Z
                                    function:  (CI_OnLineFunctionCode) download
                            role: (inapplicable)
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    dataQualityInfo:  (DQ_DataQuality)
        scope:  (DQ_Scope)
            level:  (MD_ScopeCode) dataset
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                description:  Parameter or Variable: BENTHIC SPECIES - TAXA COUNTS (measured); Units: count; Observation Category: in situ; Sampling Instrument: visual observation; Sampling and Analyzing Method: Benthic Assessment Protocols for the Atlantic Region: U.S. Caribbean, Florida and the Gulf of Mexico: 2021; Data Quality Method: Quality assurance checks for every data sheet and entry into database, as well as analytical checks for using query outputs..
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: CORAL - SPECIES IDENTIFICATION (measured); Units: presence; Observation Category: in situ; Sampling Instrument: visual observation; Sampling and Analyzing Method: Presence/absence of ESA-listed and potential ESA coral species using Benthic Assessment Protocols for the Atlantic Region: U.S. Caribbean, Florida and the Gulf of Mexico: 2021; Data Quality Method: Quality assurance checks for every data sheet and entry into database, as well as analytical checks for using query outputs..
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: CORAL (measured); Units: count; Observation Category: in situ; Sampling Instrument: visual observation; Sampling and Analyzing Method: Coral colony counts, measurements and condition recorded using Coral Demographics Survey Protocol for the Atlantic Region: U.S. Caribbean, Florida and Gulf of Mexico: 2021; Data Quality Method: Quality assurance checks for every data sheet and entry into database, as well as analytical checks for using query outputs..
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: CORAL - CENSUS (measured); Units: colony; Observation Category: in situ; Sampling Instrument: ruler; Sampling and Analyzing Method: Coral colony counts, measurements and condition recorded using Coral Demographics Survey Protocol for the Atlantic Region: U.S. Caribbean, Florida and Gulf of Mexico: 2021; Data Quality Method: Quality assurance checks for every data sheet and entry into database, as well as analytical checks for using query outputs..
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: REEF AND/OR BOTTOM REGIME - RUGOSITY (measured); Units: cm; Observation Category: in situ; Sampling Instrument: ruler; Sampling and Analyzing Method: Benthic Assessment Protocols for the Atlantic Region: U.S. Caribbean, Florida and the Gulf of Mexico: 2021; Data Quality Method: Quality assurance checks for every data sheet and entry into database, as well as analytical checks for using query outputs..
            processStep:  (LE_ProcessStep)
                description:  Parameter or Variable: CORAL - BLEACHING (measured); Units: presence; Observation Category: in situ; Sampling Instrument: visual observation; Sampling and Analyzing Method: Benthic Assessment Protocols for the Atlantic Region: U.S. Caribbean, Florida and the Gulf of Mexico: 2021; Data Quality Method: Quality assurance checks for every data sheet and entry into database, as well as analytical checks for using query outputs..
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    metadataMaintenance:  (MD_MaintenanceInformation)
        maintenanceAndUpdateFrequency:  (MD_MaintenanceFrequencyCode) asNeeded
        maintenanceNote:  Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
        contact:  (CI_ResponsibleParty)
            organisationName:  NOAA National Centers for Environmental Information
            role:  (CI_RoleCode) custodian
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    acquisitionInformation:  (MI_AcquisitionInformation)
        instrument:  (MI_Instrument)
            identifier:  (MD_Identifier)
                code:  visual observation
            type:  visual observation
            description:  not an instrument - maybe an observation type