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Vertical Plankton Tow (VPT) data from 1997 - 2003 from multiple cruises from the Northeast Pacific, California Current System (NEP project) (NCEI Accession 0114259)


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            title:  Vertical Plankton Tow (VPT) data from 1997 - 2003 from multiple cruises from the Northeast Pacific, California Current System (NEP project) (NCEI Accession 0114259)
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                date:  2013-12-06
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1416 Biological and Chemical Oceanography Data Management Office (BCO-DMO)
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                  Anchor:  http://lod.bco-dmo.org/id/person/50438 William T. Peterson
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1182 US DOC; NOAA; NMFS; Northwest Fisheries Science Center; Newport Research Station; Hatfield Marine Science Center
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                  Anchor:  http://lod.bco-dmo.org/id/person/50438 Peterson, William T.
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                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1182 Northwest Fisheries Science Center - Newport
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        abstract:  This dataset contains biological and survey - biological data collected on R/V Atlantis, R/V Elakha, R/V McArthur, R/V New Horizon, R/V Sacajawea, and R/V Wecoma during cruises AR9807, AT7-21, EL000901, EL001001, EL001002, EL001101, EL001201, EL010101, EL010201, EL010202, EL010301, EL010401, EL010402, EL010403, EL010501, EL010601, EL010602, EL010603, EL010701, EL010702, EL010801, EL010802, EL010803, EL010901, EL010902, EL011001, EL011002, EL011101, EL020101, EL020102, EL020301, EL020302, EL020303, EL020401, EL020402, EL020501, EL020502, EL020701, EL020702, EL021001, EL021101, EL030101, EL030201, EL030202, EL030302, EL030401, EL030402, EL030501, EL030502, EL030601, EL030602, EL030701, EL030702, EL030801, EL030901, EL030902, EL031001, NH0005, NH0007, NH0207, NH0307A, SJ000101, SJ000201, SJ000301, SJ000401, SJ000402, SJ000501, SJ000502, SJ000601, SJ990401, SJ990501, SJ990601, SJ990701, SJ990702, SJ990703, SJ990801, SJ990802, SJ991201, W0002A, W0004B, W0007A, W0009A, W0101C, W0103B, W0107A, W0109A, W0111B, W0202A, W0204A, W0205A, W0207A, W0212A, W0302A, W0304A, W0309B, W9711C, W9801B, W9804A, W9808A, W9809A, W9811A, W9902A, W9904B, W9907A, W9909C, and W9911A in the North Pacific Ocean from 1997-01-01 to 2003-12-31. These data include abundance, stage, taxon, and taxon_code. The instruments used to collect these data include Meter Net. These data were collected by Dr William T. Peterson of Northwest Fisheries Science Center - Newport as part of the "U.S. GLOBEC Northeast Pacific (NEP)" project and "U.S. GLOBal ocean ECosystems dynamics (U.S. GLOBEC)" program. The Biological and Chemical Oceanography Data Management Office (BCO-DMO) submitted these data to NCEI on 2023-01-23. The following is the text of the dataset description provided by BCO-DMO: Vertical Plankton Tow (VPT) data from 1997 - 2003 Dataset Description: This project was designed to make a comparison of the effects of coastal upwelling on the population dynamics and vital rates of the euphausiids Euphausia pacifica and Thysanoessa spinifera in the Northern California Current, north and south of Cape Blanco, Oregon. These data are part of a project which describes the population dynamics of these two GLOBEC target organisms. The nets sampled along several transect lines off the central Oregon coast for the purpose of describing temporal variations in euphausiid abundance, recruitment, vital rates and production. A high-frequency sampling program will be supplemented with bimonthly cruises sampling along four transect lines: two off Oregon (Newport and Coos Bay) and two off northern California (Crescent City and Eureka) during GLOBEC Long-Term Observations Program (L-TOP) cruises. Data from these survey cruises will provide information on spatial variations in euphausiid biomass, numerical abundance, vital rates and production in the waters throughout the GLOBEC study region (Newport OR south to Eureka CA). The project proposed here has four objectives: (1) determine the seasonal cycles of abundance of the two euphausiid species in relation to interannual variations in circulation, hydrography and upwelling; (2) determine the seasonal, interannual and spatial variations in egg production rates, cohort development, and recruitment as a function of upwelling and phy toplankton blooms; (3) examine the seasonal, interannual and spatial variations in mortality rates and production as a means to develop a better understanding of euphausiid population dynamics; and (4) determine overwintering strategies and the role of seasonal reversals in circulation and the spring transition in redistributing euphausiids in shelf and slope waters. All of the above data will be passed to one of the GLOBEC modelers (H. Batchelder, Univ. of California at Berkeley) who is developing an individual-based model for both euphausiid species; the proposed work is presented in the context of examining the relationship between the ecology of euphausiids and salmonid growth and survival. The VPT data are organized on the GLOBEC server by cruise within year. The master page (Level 0) lists all of the cruises in chronological order. Clicking on a cruise will show all of the casts collected/processes from that cruise (Level 1). Clicking on a cast will bring up the Level 2 file that shows a single line with additional header information for a sample. Clicking on the sample_id (always "1" for this type of data) will display the Level 3 data, which are the actual taxonomic categories and abundances for that particular sample. Additional info about the variables are described below. Program Codes Description LTOP samples collected on Long-term Observation Program Cruises (ca. 4-6 cruises per year; all sample the Newport Hydrographic (NH) Line; some sample other standard lines further south) NH more frequent, small vessel, nearshore sampling of Newport Hydrographic Line MESO_1 samples collected from process cruise in June 2000 MESO_2 samples collected from process cruise in August 2000 Life Stage Info Codes (partial listing) Description most are self explanatory; Male, Female, CV => Copepodite 5, Zoea, Nauplii, N2 => Nauplius 2, Egg--a few are not, esp. for the euphausiids (Thysanoessa and Euphausia) F2 Second Stage Furcilia (aka Furcilia 2) F3 Third Stage Furcilia (aka Furcilia 3) F1_0 First Stage Furcilia with 0 legs F2_32 or Furcilia_2_3L2S Second Stage Furcilia with 3 pairs of legs total, with 2 pairs of legs having setae; this xLyS pattern is common, with x and y varying depending on stage of development (See Hooff and Peterson, 2006)
        purpose:  This dataset is available to the public for a wide variety of uses including scientific research and analysis.
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          Anchor:  https://www.nsf.gov/awardsearch/showAward?AWD_ID=0000733 Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-0000733 Award URL: http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=0000733
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          Anchor:  https://www.nsf.gov/awardsearch/showAward?AWD_ID=9732386 Funding provided by NSF Division of Ocean Sciences (NSF OCE) Award Number: OCE-9732386 Award URL: http://www.nsf.gov/awardsearch/showAward.do?AwardNumber=9732386
        credit:  Funding provided by National Oceanic and Atmospheric Administration (NOAA) Award Number: NA67RJ0151 (NEP)
        credit:  Funding provided by National Oceanic and Atmospheric Administration (NOAA) Award Number: NA86OP0589 (NEP)
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                            description:  Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 18. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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        descriptiveKeywords:  (MD_Keywords)
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                date: (inapplicable)
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                    date:  2023
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                edition:  18
                citedResponsibleParty:  (CI_ResponsibleParty)
                    organisationName:  Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA)
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                        address:  (CI_Address)
                            city:  Greenbelt
                            administrativeArea:  MD
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                            linkage: https://forum.earthdata.nasa.gov/app.php/tag/GCMD%2BKeywords
                            protocol:  HTTPS
                            name:  GCMD Keyword Forum Page
                            description:  Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 18. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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                date: (inapplicable)
        descriptiveKeywords:  (MD_Keywords)
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                            description:  Global Change Master Directory (GCMD). 2023. GCMD Keywords, Version 18. Greenbelt, MD: Earth Science Data and Information System, Earth Science Projects Division, Goddard Space Flight Center (GSFC), National Aeronautics and Space Administration (NASA). URL (GCMD Keyword Forum Page): https://forum.earthdata.nasa.gov/app.php/tag/GCMD+Keywords
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            keyword:
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            keyword:
              Anchor:  https://vocab.ices.dk/services/pox/GetCodeDetail/SHIPC/33B3 Elakha (call sign: WCZ7501, ICES code: 33B3, 2000)
            keyword:
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            keyword:
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            keyword:
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            keyword:
              Anchor:  https://gcmd.earthdata.nasa.gov/kms/concept/5488b1cc-08b2-41cf-9bd2-4a2cdd0990de OCEAN > PACIFIC OCEAN > NORTH PACIFIC OCEAN
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            keyword:
              Anchor:  http://lod.bco-dmo.org/id/deployment/57769 California Current System
            keyword:
              Anchor:  http://lod.bco-dmo.org/id/deployment/57823 Northeast Pacific
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            otherConstraints:  Cite as: Peterson, William T. (2013). Vertical Plankton Tow (VPT) data from 1997 - 2003 from multiple cruises from the Northeast Pacific, California Current System (NEP project) (NCEI Accession 0114259). [indicate subset used]. NOAA National Centers for Environmental Information. Dataset. https://www.ncei.noaa.gov/archive/accession/0114259. Accessed [date].
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                    date:  2009-12-01
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                title:  Peterson, W. (2010) Vertical Plankton Tow (VPT) data from 1997 - 2003 from multiple cruises from the Northeast Pacific, California Current System (NEP project). Biological and Chemical Oceanography Data Management Office (BCO-DMO). Dataset version 2010-08-16. https://doi.org/10.1575/1912/bco-dmo.2453.1
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                    date:  2010-08-16
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                      Anchor:  http://lod.bco-dmo.org/id/person/50438 William T. Peterson
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                      Anchor:  http://lod.bco-dmo.org/id/person/50438 Peterson, William T.
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        language:
          LanguageCode:  eng; USA
        characterSet:  (MD_CharacterSetCode) utf8
        topicCategory:  (MD_TopicCategoryCode) environment
        topicCategory:  (MD_TopicCategoryCode) oceans
        topicCategory:  (MD_TopicCategoryCode) biota
        extent:  (EX_Extent)
            geographicElement:  (EX_GeographicBoundingBox)
                westBoundLongitude:  -126.19
                eastBoundLongitude:  -123.44
                southBoundLatitude:  38.29
                northBoundLatitude:  44.65
            temporalElement:  (EX_TemporalExtent)
                extent:
                  TimePeriod:
                    beginPosition:  1997-01-01
                    endPosition:  2003-12-31
        supplementalInformation:  Acquisition Description: "Zooplankton were collected using a 0.5 meter diameter, 202 micron mesh net towed verticaly from within 5 meters of the bottom (to a maximum depth of 100 m) to the surface at a rate of 30 meters per minute. A TSK flowmeter was used to monitor the amount of water filtered. The samples were preserved in a 5% buffered formalin/seawater solution." (W.T. Peterson, et al., 2002 p. 392) In this accession, NCEI has archived multiple versions of these data. The latest (and best) version of these data has the largest version number.
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    distributionInfo:  (MD_Distribution)
        distributor:  (MD_Distributor)
            distributorContact:  (CI_ResponsibleParty)
                organisationName:
                  Anchor:  https://www.ncei.noaa.gov/archive/archive-management-system/OAS/bin/prd/jquery/institution/details/1730 NOAA National Centers for Environmental Information
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                    phone:  (CI_Telephone)
                        voice:  +1-301-713-3277
                    address:  (CI_Address)
                        electronicMailAddress:  NCEI.Info@noaa.gov
                role:  (CI_RoleCode) pointOfContact
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                fees:  In most cases, electronic downloads of the data are free. However, fees may apply for custom orders, data certifications, copies of analog materials, and data distribution on physical media.
                orderingInstructions:  Contact NCEI for other distribution options and instructions.
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                    linkage: https://www.ncei.noaa.gov/archive/accession/0114259
                    protocol:  HTTPS
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                    description:  Navigate directly to the URL for a descriptive web page with download links.
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                    linkage: https://www.ncei.noaa.gov/archive/accession/oas/114259
                    protocol:  HTTPS
                    applicationProfile:  Web browser
                    name:  Descriptive Information
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                    linkage: https://www.ncei.noaa.gov/archive/accession/download/114259
                    protocol:  HTTPS
                    applicationProfile:  Web browser
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                    description:  Navigate directly to the URL for data access and direct download.
                    function:  (CI_OnLineFunctionCode) download
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                    linkage: ftp://ftp-oceans.ncei.noaa.gov/nodc/archive/arc0062/0114259/
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                    description:  These data are available through the File Transfer Protocol (FTP). FTP is no longer supported by most internet browsers. You may copy and paste the FTP link to the data into an FTP client (e.g., FileZilla or WinSCP).
                    function:  (CI_OnLineFunctionCode) download
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    dataQualityInfo:  (DQ_DataQuality)
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            level:  (MD_ScopeCode) dataset
        lineage:  (LI_Lineage)
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0114259 v1.1 was published.
                dateTime:
                  DateTime:  2013-12-06T16:25:07Z
                output:  (LE_Source)
                    sourceCitation:  (CI_Citation)
                        title:  NCEI Accession 0114259 v1.1
                        date:  (CI_Date)
                            date: (inapplicable)
                            dateType:  (CI_DateTypeCode) publication
                        citedResponsibleParty:  (CI_ResponsibleParty)
                            individualName: (inapplicable)
                            contactInfo:  (CI_Contact)
                                onlineResource:  (CI_OnlineResource)
                                    linkage: https://www.ncei.noaa.gov/archive/accession/0114259/1.1
                                    protocol:  HTTPS
                                    name:  NCEI Accession 0114259 v1.1
                                    description:  published 2013-12-06T16:25:07Z
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                            role: (inapplicable)
            processStep:  (LE_ProcessStep)
                description:  NCEI Accession 0114259 was revised and v2.2 was published.
                rationale:  Updates were received for this dataset. These updates were copied into the data/0-data/ directory of this accession. These updates may provide additional files or replace obsolete files. This version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession.
                dateTime:
                  DateTime:  2023-03-30T19:53:31Z
                output:  (LE_Source)
                    sourceCitation:  (CI_Citation)
                        title:  NCEI Accession 0114259 v2.2
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                                    linkage: https://www.ncei.noaa.gov/archive/accession/0114259/2.2
                                    protocol:  HTTPS
                                    name:  NCEI Accession 0114259 v2.2
                                    description:  published 2023-03-30T19:53:31Z
                                    function:  (CI_OnLineFunctionCode) download
                            role: (inapplicable)
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    dataQualityInfo:  (DQ_DataQuality)
        scope:  (DQ_Scope)
            level:  (MD_ScopeCode) repository
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                other:  NOAA National Centers for Environmental Information
        lineage:  (LI_Lineage)
            processStep:  (LE_ProcessStep)
                description:  NOAA created the National Centers for Environmental Information (NCEI) by merging NOAA's National Climatic Data Center (NCDC), National Geophysical Data Center (NGDC), and National Oceanographic Data Center (NODC), including the National Coastal Data Development Center (NCDDC), per the Consolidated and Further Continuing Appropriations Act, 2015, Public Law 113-235. NCEI launched publicly on April 22, 2015.
                dateTime:
                  DateTime:  2015-04-22T00:00:00
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    metadataMaintenance:  (MD_MaintenanceInformation)
        maintenanceAndUpdateFrequency:  (MD_MaintenanceFrequencyCode) asNeeded
        maintenanceNote:  Metadata are developed, maintained and distributed by NCEI. Updates are performed as needed to maintain currentness.
        maintenanceNote:  NCEI Accession 0114259 was revised and a new version of the archival package was published. Updates to existing archival packages may provide additional files or replace obsolete files. The latest version contains the most complete and up-to-date representation of this archival information package. All of the files received prior to this update are available in the preceding version of this accession. Please see journal.txt in the /about directory for additional details on changes made.
        contact:  (CI_ResponsibleParty)
            organisationName:  NOAA National Centers for Environmental Information
            role:  (CI_RoleCode) custodian
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    acquisitionInformation:  (MI_AcquisitionInformation)
        instrument:  (MI_Instrument)
            identifier:  (MD_Identifier)
                code:  net - plankton net
            type:  net - plankton net
            description:  net - plankton net
        platform:  (MI_Platform)
            identifier:  (MD_Identifier)
                code:  NEW HORIZON
            description:  Flag: United States Type: Research Vessel IMO: 7723821 Operator: Scripps DOB: 1978-09
            instrument: (missing)
        platform:  (MI_Platform)
            identifier:  (MD_Identifier)
                code:  NOAA Ship McArthur
            description:  Title: NOAA Ship Flag: United States of America Vessel Type: Research Vessel (Hydrographic) DOB: 1965 IMO: 6602082 Decommissioned as NOAA Ship MCARTHUR May 20, 2003
            instrument: (missing)
        platform:  (MI_Platform)
            identifier:  (MD_Identifier)
                code:  R/V Atlantis
            description:  Flag: United States of America Vessel Type: Research Vessel (Oceanographic) DOB: Mar 1997 IMO: 9105798 AS OF 3/3/1997 - WHOI https://www.whoi.edu/what-we-do/explore/ships/ships-atlantis/
            instrument: (missing)
        platform:  (MI_Platform)
            identifier:  (MD_Identifier)
                code:  R/V Elakha
            description:  Updated information from ICES for the vessel Elakha from UNITED STATES(US). Name : Elakha Country(s) : UNITED STATES(US) (ISO Country Code) Platform Class : 31 Research vessel Call Sign : WCZ7501 MMSI: 366838530 Title : R/V Commissioned Date : 2000-08-31 Current Length : 16 Built : 2000 WOD Code: 8810 Information Sources: - http://www.shipops.oregonstate.edu/ops/elakha/ - http://wireless2.fcc.gov/UlsApp/UlsSearch/license.jsp?licKey=1573086 - http://www.piscoweb.org/about-pisco/campuses/research-vessels/r/v-elakha
            instrument: (missing)
        platform:  (MI_Platform)
            identifier:  (MD_Identifier)
                code:  R/V WECOMA
            description:  R/V WECOMA is owned by the National Science Foundation and operated under a Cooperative Agreement by Oregon State University, College of Oceanic & Atmospheric Sciences.
            instrument: (missing)